KEGG   Brassica napus (rape): 106452219
Entry
106452219         CDS       T04128                                 
Name
(RefSeq) tRNAse Z TRZ4, mitochondrial
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bna03016]
    106452219
Enzymes [BR:bna01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     106452219
Transfer RNA biogenesis [BR:bna03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    106452219
 Prokaryotic type
    106452219
SSDB
Motif
Pfam: Lactamase_B_4 Lactamase_B_2 Lactamase_B
Other DBs
NCBI-GeneID: 106452219
NCBI-ProteinID: XP_013749730
UniProt: A0A816TQK3
Position
A5:complement(23086237..23090706)
AA seq 925 aa
MLTSMPHHNLTLLGFSPLKSSSFALFLRPFSLYPILASSPPPSSPRRPRAAGYRRSDPSP
RFPPRRKWSSFEEEKSRQRKGMSSSSDSFEFNKRRAEGKDKIDKPKKSLKRNTRTLNPTN
TIAYVQILGTGMDTQDTSPSVLLFFDKQRFIFNAGEGLQRFCTEHKIKLSKVDHIFLSRV
CSETAGGLPGLLLTLAGIGEDGLSVNVWGPSDLKYLVDAMRSFIPRAAMVHTRSFGPSDS
TPQISSSKAKDDPFVLVNDEVVKISAILLEPGSKSGETSVVYVCELPEINGKFDPAKAMA
LGLRAGPKYGKLQSGQSVKSDFKDITVHPSDVMGPSVPGPVVLLVDCPTESHAEELLSTP
SMKSYYSTDGDKFVNCIIHLSPASVTNSATYQSWMKRFHSAQHILAGHETKNMEFPILKA
SSRITARLNYLCPQFFPAPGFWSPQHATDLTNPDSSSKCFGSSLGENVSAENLLKFTLRP
HVNLGIDRSCIPSQLTSSRVIDELLSEIPEISSKTEEVKRLWNGPHNNKMMIEEPWLNES
TVPSCLENIRRDDMEIVLLGTGSSQPSRYRNVSAVYIDLFSRGSMLLDCGEGTLGQLKRR
YGLQGADEAVKKLKCIWISHIHADHHTGLARILARRRELLKGGAREPVIVVGPRPLKNFL
DAYQRLEDLDMEFLDCRNTTSTSWASLETTSPEKTTSNGSAEGSLFSKGSPMQSIYKRPS
SPVTDNASALPYLKKLKRVLGEMGLEDLISFPVVHCPQAFGVVLKAAERKNMAGDKIPGW
KTVYSGDTRPCPQMVEASKGATVLIHEATFEDALVEEAVAKNHSTTKEAIDVGSSAGVYR
IILTHFSQRYPKIPVIDESHMHNTCIAFDMMSINMADLHVLPKVVPYFKNLFRNVVVDDE
DDEGEEESDDGLMMSVNKVSSFFRN
NT seq 2778 nt   +upstreamnt  +downstreamnt
atgttaacttcaatgcctcatcataatctaaccctcctcggcttctctcctctaaagtct
tcctctttcgctctcttcctccgacccttttctctctacccaatcctcgcctcttctcct
cctccctcttctcctcgccgtcctcgcgccgccggttaccgacgcagcgacccttctcct
cgcttccctccgcgacgcaagtggagcagcttcgaggaggagaagagtaggcagaggaaa
ggcatgtcgtcgtcttcagattccttcgagtttaacaagaggagagctgagggaaaggat
aagatcgataagcctaagaagagtctcaagaggaacactcgcacgcttaatcccaccaac
accattgcctatgtccagatacttggaacggggatggatacacaggacacgtcaccttct
gtgttactcttttttgacaaacaaagattcatctttaatgctggagagggcttgcaacgt
ttctgtacagaacataaaattaagttatcaaaggtggatcatatatttttatctcgtgtg
tgctcagagacagcaggtggacttccaggtcttctactcactctagctggtatcggagaa
gatggtttatccgtgaacgtatggggtccttcggatctcaagtacttagttgatgctatg
aggtcattcatccctcgtgcagcaatggtacacacacgaagttttggcccatctgactcc
actcctcagattagctcgagtaaagccaaggatgatccctttgttcttgttaatgacgaa
gttgtgaaaatctccgctattctccttgaaccaggaagcaaatctggtgaaacgtcggtt
gtgtatgtttgtgagttacctgaaatcaatggaaaatttgatccggccaaggccatggct
cttggacttagagctggtccaaagtacggtaaacttcagtctggacagtcggtgaagtca
gatttcaaagatatcacggttcatccgagtgatgtgatgggaccttcggttcctggtcct
gttgttttgcttgtggactgtccaacggagtcacacgctgaggaactgctatctactcca
tcgatgaagagttattattcaacagatggggataagtttgttaattgtattatacatttg
agtccagcttctgtgacgaatagtgcgacttaccagagctggatgaagaggtttcattct
gctcagcacattctcgctggacatgagacgaagaatatggagtttcccatcttgaaagct
agttctagaatcacggccagacttaactatctatgcccacagttctttccagctcctgga
ttttggtctcctcaacatgcaactgacttgacaaatccagattcttctagcaagtgcttt
ggttcaagtcttggtgaaaacgtttcagctgaaaatcttctcaagttcactctgcgtcca
catgtcaaccttgggatagacagatcttgtatccctagtcaattaacgtcctcacgagta
atagatgagctactctcagagattcctgagatcagctccaagaccgaagaagtcaagcgt
ttatggaacggaccacacaacaacaagatgatgatcgaagagccgtggctgaacgagagc
actgtcccaagctgtcttgaaaacatcagacgagacgacatggagatagtccttttaggc
accggttcgtcccaaccttcaagatacagaaacgtcagtgcggtttacatcgacctgttc
tctagaggtagcatgctcttggactgcggggaaggcactttggggcagcttaaacgaaga
tacggtttacaaggagctgatgaagcggttaagaaattgaaatgtatatggatctctcac
atccatgctgatcaccacacgggacttgctagaatccttgctcgtagacgtgagcttttg
aaaggaggggctcgtgagccggtgattgtggttggaccaagaccgcttaagaactttctc
gatgcgtatcaaagacttgaggatttggatatggagtttcttgattgtaggaacaccact
tcgacttcttgggcttctctagaaaccaccagccctgagaaaactaccagcaacggtagt
gcagaaggttctttgtttagtaaaggaagtccaatgcagagtatatacaaaagaccgagt
agcccagtaacggacaatgcttcagctttaccgtacttgaagaaactgaaaagggttcta
ggagaaatgggtttagaggatttgattagttttcctgttgtgcattgccctcaagccttt
ggggttgttttaaaagcagcagagagaaagaacatggccggagataagattccgggttgg
aaaactgtttactcaggcgacacaaggccttgtcctcaaatggttgaagcttcaaaagga
gcaactgttcttatacatgaggccacgtttgaggatgcgttggtagaagaagctgttgca
aagaaccatagcacgactaaagaagcaatcgacgttggatcttcggcaggagtgtaccgg
atcatactgactcattttagccagaggtatccgaagattccggtgattgacgagtctcac
atgcacaacacatgcattgctttcgatatgatgagcataaacatggcggatttgcatgtg
cttccaaaggttgttccttacttcaaaaacctgttcagaaacgtggtggttgatgatgaa
gatgatgaaggagaagaagagagtgatgatggtttgatgatgagtgtcaacaaagtctca
agctttttccgcaattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system