KEGG   Brassica napus (rape): 106454364
Entry
106454364         CDS       T04128                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
bna  Brassica napus (rape)
Pathway
bna03020  RNA polymerase
bna03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106454364
  09124 Replication and repair
   03420 Nucleotide excision repair
    106454364
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bna03021]
    106454364
   03400 DNA repair and recombination proteins [BR:bna03400]
    106454364
Transcription machinery [BR:bna03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     106454364
DNA repair and recombination proteins [BR:bna03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      106454364
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 106454364
NCBI-ProteinID: XP_013751949
Position
A2:22744684..22746236
AA seq 209 aa
MSEKGGKGFKSSLKSSYGPGKDDNATKSKKTRKVQFDPQGPRESKYTFLQDSDEQIQGSS
AKGGKGSKARKSTLSKESQPLELKTDKELPENAKCLMDCEAFEILQGIKEQMAVLSEDPS
VKLPVSFDRGLEYVKYGRCYMNPQSVRQILEPLKKHGVSESEMCVIANVCPESIDEVFAF
VPSMKGRKDKISEPLEEALMKLSKLKRSA
NT seq 630 nt   +upstreamnt  +downstreamnt
atgtcggagaaaggaggaaaagggttcaaatcttctctcaaatcctcttatggacccggc
aaggatgataacgcaaccaagtccaagaagacaaggaaagtccaatttgatcctcaaggc
ccacgagagtccaagtacacgtttcttcaagactctgatgaacagattcaaggttcttct
gctaaaggtgggaagggaagcaaggctaggaagagtactctgtctaaagagtctcagccg
cttgagcttaagactgataaggagcttccggagaatgcaaagtgcttgatggattgtgaa
gcttttgagattctgcaaggcatcaaggagcaaatggctgtgctatctgaagatcctagc
gtaaagcttcctgtgtctttcgacagaggactggagtatgtgaagtatggtcgttgctac
atgaatcctcagtctgtcagacagatccttgagcctctgaaaaagcatggtgtttctgaa
agcgagatgtgtgtgattgccaatgtctgtccagaaagcattgatgaagtctttgctttt
gttccatccatgaagggaagaaaagacaagatcagtgagcccttagaagaggcattgatg
aagctctccaagctcaaaagatctgcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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