KEGG   Brassica napus (rape): 111205227
Entry
111205227         CDS       T04128                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
bna  Brassica napus (rape)
Pathway
bna00040  Pentose and glucuronate interconversions
bna01100  Metabolic pathways
Module
bna_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:bna00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    111205227
Enzymes [BR:bna01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     111205227
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3
Other DBs
NCBI-GeneID: 111205227
NCBI-ProteinID: XP_022556471
Position
C4:complement(41891680..41893524)
AA seq 248 aa
MMQTISFVESSRVKVKGLLSLNSQMFHIVINRCRNVKINDIRIVADGKSPNTDGIHVQLS
TDVEIRNASIKTGDDCISIGPGTKNLWVERVTCGPGHGISIGSLGKDREEEGVQNVTVKK
TVFVGTDNGLRIKSWANPSSGFVQRVRFLESLMFNVKFPLIIDQHYCPHNINCPSQESGV
RINDVIYQGIRGTSATKIAVKLDCSAKAPCTRIRMKDISLRYANEAAQSSCVNVLGDALG
LVKHQTCF
NT seq 747 nt   +upstreamnt  +downstreamnt
atgatgcagacaataagttttgtggagtcaagtagagtcaaggtgaagggattattgtca
ttgaacagccaaatgttccacatcgtcattaatcgatgccgtaatgttaagatcaacgat
attcggatcgtggcggatggaaaaagcccgaacacagatggcattcatgtccaactatca
actgatgttgaaattcgtaacgcttccatcaaaactggtgacgactgtatctccattggc
cccggaaccaagaacttgtgggtcgaacgagtcacatgtggccctggtcatggaatcagc
attgggagcttgggaaaagatagagaagaggaaggggtacaaaatgtgacggtgaagaaa
acagtttttgtaggaacagacaatggattaagaattaagtcatgggctaacccatcatcc
ggttttgttcagagggttcgattcttagagtctcttatgttcaatgtcaagtttcctctc
atcattgaccaacactattgccctcataacataaactgtccttctcaggaatcaggagtg
aggataaacgatgtgatatatcaaggcataagaggaacatcagctacaaaaattgcggta
aaattggattgcagtgctaaagctccatgcacacgtattagaatgaaggacattagtctg
agatatgctaatgaagctgcacaatcttcatgtgtcaatgtccttggagatgcacttggt
ttggtcaaacatcaaacctgcttctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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