KEGG   Brassica napus (rape): 111207157
Entry
111207157         CDS       T04128                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 35
  KO
K13116  ATP-dependent RNA helicase DDX41 [EC:5.6.2.7]
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bna03041]
    111207157
Spliceosome [BR:bna03041]
 Complex C
  Other components
   Complex C specific factors
    111207157
SSDB
Motif
Pfam: DEAD Helicase_C ResIII zf-CCHC SecA_DEAD UTP25
Other DBs
NCBI-GeneID: 111207157
NCBI-ProteinID: XP_022560593
Position
A7:28130390..28132733
AA seq 588 aa
MEVDDDYVEYVPVAKRRALEEQKILQRKGKVLEVEEEASEKEKLAESKPSLLVQATQLKR
DVPEVSATEQIILQEKEMMEHLSDKKTLMSVRELAKGITYTEPLLTGWKPPLRIRKMSRK
QMDLIRKQWHIIVSGEDIPPPIKSFEDMKFEKPILDTLREKGIVQPTPIQVQGLPVILSG
RDMIGIAFTGSGKTMVFVLPMIMIALQEEMMMPIGPGEGPIGLIVCPSRELARQTYEVVE
QFVAPLVKAGFAPLRSLLCIGGVDMRSQLDVVKRGVHIVVATPGRLKDLLAKKKMNLDAC
RYLTLDEADRLVDLGFEDDIREVFDHFKSQRQTLLFSATMPTKIQIFARSALVKPVTVNV
GRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTSPPVLIFCENKADVDDIHEYLLLKGVE
AVAIHGGKDQEDREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVH
RIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELKDPMEEAENIAN
ASGVKGCAYCGGLGHRIRDCPKLEQQKSVAISNSRKDYFGSGGYRGEI
NT seq 1767 nt   +upstreamnt  +downstreamnt
atggaagtagacgatgattacgtggagtatgttccagttgcgaagcgtagagcgctggaa
gagcagaagattcttcaacggaagggcaaagtgttggaggtggaggaagaagcttcggag
aaggagaagctcgccgaatccaaacctagcttgctcgtccaagcaactcagctcaagcgt
gacgtacccgaagtcagtgctaccgagcaaatcatcctacaagagaaggagatgatggag
catctctctgataagaagacgctcatgtctgttcgtgagttagccaaaggtatcacttac
acagagcctctcttaacaggttggaaacctcctttgcgtattaggaagatgtctaggaag
cagatggatttgatcaggaagcagtggcatatcattgttagcggtgaagacattcctcct
cccatcaagagcttcgaggatatgaagttcgagaaacctattttggatacgctcagggag
aaagggattgtgcagcccactcctattcaagttcagggtcttcctgtgattttgtctggg
agagatatgattgggattgccttcactggttccgggaagacgatggttttcgtgcttccc
atgatcatgattgctctccaggaggagatgatgatgcctattggtcctggagaaggcccc
attggccttattgtttgcccttctagagagcttgctaggcagacttacgaagttgttgaa
cagtttgtggctcctttggtcaaggctggattcgcgcctttgaggtctttgctatgcatt
ggaggtgtcgatatgaggtcccagttggatgttgtcaagagaggtgttcacattgttgtt
gctacccctgggaggttgaaggatttgctcgccaagaaaaagatgaacttagatgcctgc
aggtacctgacgctggatgaggcagataggttggttgatttgggtttcgaagatgacatt
agggaagtctttgaccatttcaagtctcagcgtcaaacacttctcttctctgccacaatg
cccaccaaaattcaaatctttgccagaagtgctctggtgaaacctgtgacagtcaacgta
ggaagagccggagctgcgaatctcgatgttatccaggaggttgaatacgtcaaacaagaa
gcaaagattgtttacctccttgagtgcctgcagaaaacctctccgccggttttaattttc
tgtgagaacaaggctgatgttgatgatatccacgagtacttgttactgaaaggagtggaa
gctgttgctatacacggaggtaaagatcaggaggacagagagtacgcaatctcttcgttc
aaagctgggaagaaagacgtcttggtcgccactgacgttgcttcaaaagggttagacttc
cctgatattcagcacgtcataaactacgacatgcctgcggagattgagaactatgtgcac
aggataggaagaacaggtcggtgtgggaaaacagggatagcaactacgtttataaacaag
aaccaaagcgagaccacgctgcttgatctgaaacacttgctgcaagaagctaaacagagg
attccacctgtccttgctgagctgaaggatccgatggaggaagcagagaatattgctaat
gcaagtggtgtcaagggttgtgcttactgtgggggtctgggacatcgtattagagactgt
ccgaaactggagcagcagaagagtgtggccatatctaactctaggaaagactacttcggc
tctggtggatacagaggagagatataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system