KEGG T04375: DA69

Brevundimonas naejangsanensis: DA69_00385

Entry

DA69_00385        CDS       T04375

Name

(GenBank) FAD-dependent cmnm(5)s(2)U34 oxidoreductase

K15461

tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]

Organism

bne Brevundimonas naejangsanensis

Brite

KEGG Orthology (KO) [BR:bne00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bne03016]
    DA69_00385
Enzymes [BR:bne01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.61  tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
     DA69_00385
Transfer RNA biogenesis [BR:bne03016]
Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    DA69_00385

SSDB

Motif

Pfam:

Methyltransf_30 DAO NAD_binding_9 NAD_binding_8 Pyr_redox_2 FAD_binding_3 F420_oxidored Pyr_redox AlaDh_PNT_C MurD-like_N 3HCDH_N TrkA_N NAD_binding_7 Shikimate_DH Thi4

Other DBs

NCBI-ProteinID:

ANF53364

UniProt:

A0A172Y2B9

Position

complement(75396..77222)

AA seq 608 aa
MTHPADIAPDDASPLLVWAEDGSPRSGRFGDVYFSKDDGLAETRAVFLQGCGLPEAWSGR
SAFSVGELGFGTGLNIVALLDLWRRTRPENGRLKVFSIEGFPLTREEAARALAAWPELAE
TAAGLLAVWPAGTPGFHRLDLPQWGATIDLAVGDARWALEQWSGAADAWFLDGFSPALNP
GMWSPEIMALVAARSAPGARLATFTVAGAVRRGLAEHGFTVEKKPGHGRKRERLEARMAG
EPRPERPVHVAVVGAGIAGAAVARALIAEGARVTVIEAERAGAGASGFPASLVTPRLDAG
DALIAGLHAQALERAGDLYRALRGAVVAEGVLQLEQAPRDAVRFDKIAAQELWAEGAMQR
LDAAACSMRLGETTPRGGLMMAQALAVRSDAILEPWLEGAERIAGRVARLEPMTDGWRLS
GEDDAVLIEADVVVLAAGWGTARLAPDLPLSPVAGQADWIEDEAAPGPSVPAAWGGYAAP
TGRGMLYGATHDRGVETPEASDEASARNRATLGAALPQCAARVEAAPAQARGRRAAVRAT
TPDRLPLCGRWRPGLFVLTGLGSRGFCVAPLLGEHLAALAMGRPSPLSAEAARRLSATRW
LTEGDNAV

NT seq 1827 nt +upstreamnt +downstreamnt
atgacccatcccgccgacatcgcgcctgacgacgcctctccgcttctcgtgtgggccgag
gacggctcgccgcgctcgggccgattcggcgacgtatacttctccaaggacgacggcctg
gccgagacgcgggcggtcttcctgcagggctgcggcctgccggaggcgtggagcgggcga
tccgccttcagcgtgggcgagctgggcttcggcaccgggctgaacatcgtcgccctgctg
gacctgtggcgacggacgcggcccgagaacgggcggctcaaggtcttctccatcgaaggc
ttccccctgacgcgcgaagaggcggcgcgggcgctggcggcctggcccgagctggccgag
acggccgccgggctgctggcggtctggccggccgggacgcccgggtttcatcggctggac
ctgccgcagtggggggcgacgatcgacctggccgtcggcgacgcgcgatgggcgctggag
caatggtcgggcgcggccgacgcctggtttctggatggattttcgccggcgctgaacccc
ggcatgtggtcgcccgagattatggcgctggtcgcggcgcgctcggcgcccggcgcgcgg
ctggccaccttcaccgtcgcgggggccgtgcggcggggcctggccgagcacggctttacg
gtcgagaaaaagcccggccacggccgcaagcgcgaacggctggaagcgcggatggcgggc
gagccgcggccggagcggccggtccacgtcgccgtcgtcggcgccgggatcgccggggcg
gccgtggcgcgggccctgatcgccgagggcgcgcgcgtcaccgtcatcgaggccgagcgg
gcgggcgcgggggcctcgggctttcccgcgtcgctggtcacgccccggctggatgcgggc
gacgccctgatcgccggtcttcacgcccaggcgctggagcgggcgggcgacctctatcgc
gccctgcgcggcgccgtggtcgccgagggcgtgctgcaactggagcaggcgccgcgcgac
gccgtccggttcgacaagatcgccgctcaggagctgtgggccgaaggggcgatgcagcgc
ctggacgcggcggcgtgctcgatgcgtctgggcgagacgacgcctcgcggcgggctgatg
atggcgcaggcgttggccgtgcgctccgacgccatactggagccgtggctggagggggcc
gagcggatcgccgggcgcgtggcgcggctggagccgatgacggacggatggcgcctgtcg
ggcgaggacgacgccgtgctgatcgaggcggacgtcgtggtgctggcggcgggctggggg
acggcgcggctggcgcccgacctgccgctgtcgcccgtggccgggcaggcggactggatc
gaggacgaagcggcgcccggcccgagcgtcccggcggcctggggcggctatgcggcgccg
accgggcgggggatgctctacggcgccacccacgaccggggcgtcgaaacgcccgaggcg
tccgacgaggccagcgcccgcaaccgggcgaccctcggcgccgccctgccccaatgcgct
gcgcgcgtcgaggccgcgcctgctcaggcgcgggggcgccgcgcggccgtgcgcgccacg
acgcctgaccgcctgcccctgtgcggccgatggcgccccggcctgttcgtcctgaccggt
ctgggctcgcgcggcttctgcgtcgcccccctgctgggcgagcatctggcggccctggcc
atggggcggccctcgcccctgagcgccgaggcggcgcgccggctgtcggcgacccgttgg
ctgaccgaaggcgataacgccgtttaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (35)   

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