KEGG   Brenneria nigrifluens: EH206_22350
Entry
EH206_22350       CDS       T06070                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
bng  Brenneria nigrifluens
Pathway
bng03030  DNA replication
bng03410  Base excision repair
bng03420  Nucleotide excision repair
bng03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bng00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EH206_22350 (polA)
   03410 Base excision repair
    EH206_22350 (polA)
   03420 Nucleotide excision repair
    EH206_22350 (polA)
   03440 Homologous recombination
    EH206_22350 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bng03032]
    EH206_22350 (polA)
   03400 DNA repair and recombination proteins [BR:bng03400]
    EH206_22350 (polA)
Enzymes [BR:bng01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EH206_22350 (polA)
DNA replication proteins [BR:bng03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     EH206_22350 (polA)
DNA repair and recombination proteins [BR:bng03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     EH206_22350 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     EH206_22350 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc HHH HHH_5
Other DBs
NCBI-ProteinID: QCR06648
Position
complement(4753057..4755849)
AA seq 930 aa
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLLVQYHPSHVAV
VFDAKGKTFRDELFENYKSHRPPMPDDLREQIEPLHRMVKAMGLPLLAVSGVEADDVIGT
LALQAEKAGIPVLISTGDKDMAQLVTPNVTLINTMNNTILGPQEVCDKYGIPPELIIDFL
ALMGDASDNIPGVPGVGEKTAQALLQGLGGLDVLYANLDKIAGLSFRGAKTMAPKLEQNK
DVAYLSYQLATIKTDVELDLTCEQLTVNEPEVDELHGLFTRYEFKRWLAEVESGTWLQGK
KSHQPVQKIVKAVQDSASDDESGMTLSADGYVTILDEKTLLEWIERLKKAEVFAFDTETD
GLDTLTANLIGMSFSVTPGEAAYLPLAHDYLDAPEQLDRTWVLALFKPLLEDETLLKVGQ
NLKFDKGVMKRYDIELRGIAFDTMLESYVLDSVAGRHDMDSLAERYLQHKTITFEDIAGK
GKNQLTFNQIALEQASPYAAEDVDVTLHLHHKLWTKLQQHPELRKVFQEIDMPLVPVLSR
IERTGVLIDPHILADHSKELTVRLGELETQAYELAGEEFNLSSTKQLQGILYEKQKLPVL
KKTPKGAPSTNEEVLAELALNYPLPKLILEYRGLAKLKSTYTDKLPLMINPSTKRVHTSY
HQAVTATGRLSSSDPNLQNIPVRNEEGRRIRQAFIAQEGYSIVAADYSQIELRIMAHLSG
DKGLLKAFSEGLDIHRATAAEVFGLALEKVTSEQRRSAKAINFGLIYGMSAFGLSRQLNI
PRSESQKYMNLYFERYPGVQEYMEGTRQQAAEQGYVSTLDGRRLYLPDIHSRNAMARKGA
ERAAINAPMQGTAADIIKKAMIAIDGWLQQQNKPLVKMLMQVHDELVFEVHNTVLEESKS
KIRELMENCMQLNVPLRVDIGAGNNWDEAH
NT seq 2793 nt   +upstreamnt  +downstreamnt
atggctcagattgcagaaaaccctttaattttggtggacggttcttcctatttgtaccgt
gcatatcacgcgtttccgccgttgacaaatagcgcgggagagcccaccggcgcgatgtac
ggcgtattgaatatgctgcgcagcctgctggtgcaatatcatcccagccatgtcgcggtg
gtatttgatgccaagggaaaaacgtttcgtgacgagctatttgagaactataagtctcat
cgaccgccgatgccggatgatttgcgcgaacagattgaacctttgcatcgtatggtaaag
gcgatgggattgccgttgctggcggtttccggcgtcgaggccgatgacgttatcggcacg
ctagccctacaggctgaaaaggcgggtattccggtgctgatcagtaccggtgataaagat
atggcccagttggtgacgccaaacgtcacgctaatcaacaccatgaataatactattttg
ggccctcaggaagtgtgcgacaaatatggtattcctccggagttgattatcgatttcctg
gccttgatgggcgacgcttccgacaatatccccggcgtgcccggcgtgggtgaaaaaacg
gcgcaggctttgctgcaagggctgggcggtctggatgtgctgtatgcgaatctggacaag
attgccggattgtcgttccgcggcgccaagaccatggcgccgaaacttgagcagaataaa
gacgttgcttacctttcctatcagttggccaccattaaaacggatgttgaactggatctg
acatgcgaacagttaacggtgaacgaaccggaagtggatgagctgcatggcttattcacc
cgctacgaattcaaacgctggttagcagaggtcgagtccggtacctggctgcagggtaaa
aaaagccatcagcctgtgcagaaaatcgttaaagccgtacaggatagcgcgagcgatgac
gaaagcggcatgacgctttccgccgacggttatgtcactatcctggatgaaaaaacgctg
ttggagtggattgagcgtttaaagaaagccgaggttttcgcttttgataccgaaaccgat
gggctggacaccctgacggccaaccttatcggcatgtccttttctgtgacgccgggcgaa
gccgcttatctgccgctggcgcatgattatctggatgcgccggaacagttggatcggacc
tgggttctggcgctgtttaaaccgttgctggaagatgagacgctgctcaaggtaggccag
aatctcaagttcgataaaggcgtgatgaaacgttatgacatcgaattacgcggaatcgcc
tttgataccatgctggaatcttatgttctggacagcgtcgccgggcgtcatgatatggat
agcctggcggagcgctatctgcagcataaaaccattacctttgaggatatcgccggcaaa
ggcaaaaaccagcttacctttaatcagattgcgctggagcaggccagtccttatgcggcg
gaagatgtcgatgtcacgctgcatttgcatcacaagctgtggactaaattacagcagcat
ccggaactgcgaaaagtgtttcaggaaatcgatatgccgctggtgccggtgctatcccgc
atagagcgtacgggcgtgctgatcgatccgcatattctggctgatcactccaaagaactc
accgtccgtctgggcgagttggaaacgcaggcctacgaactggcgggcgaagagtttaac
ctgtcgtcaaccaagcagctgcagggcattctgtatgaaaagcaaaagctgccggtgctg
aaaaaaacgcccaaaggggcgccctccaccaatgaagaggtgctggccgaactggcgctg
aattatccgctgccgaagctgattcttgaatatcgcgggctggcaaaactgaagtcgacc
tacaccgataagctgccgctgatgattaacccgtctaccaaacgggtgcatacttcttat
catcaggcggtgacggccaccggccgcttatcctccagcgatcctaacctgcagaatatt
ccggtgcgcaacgaggaagggaggcgtatccgccaggcctttattgcgcaggaagggtat
agcattgtggcggccgactattcacagattgaactgcgcatcatggcgcatctttccggc
gacaaaggcttgctgaaagccttctccgaggggctggatatccatcgggcgacagcggcg
gaggtttttggactcgcccttgagaaggtgacgtccgaacagcgccgcagcgccaaagcg
attaacttcggtctgatttatggcatgagcgcttttgggctatcgcgccagttgaatatt
ccgcgtagtgaatcacagaagtatatgaatctgtatttcgagcgttatcccggcgttcag
gagtatatggagggaacccgccagcaggcggcggaacagggctatgtctcgacgctggat
ggccgccgtctttacctgccggatattcattcacgcaacgccatggcccgcaaaggcgcc
gagcgggcggcgattaacgctccgatgcagggaaccgctgccgatatcatcaagaaagcg
atgatcgctattgatggctggttacagcagcagaacaagccgttagtgaagatgcttatg
caggttcacgatgagctggtctttgaggttcataatacggtattggaagaatccaaaagt
aaaatcagagagttaatggaaaactgtatgcagcttaacgtcccgctgcgggttgatatc
ggcgccgggaacaactgggacgaggcgcactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system