KEGG   Brettanomyces nanus: FOA43_000723
Entry
FOA43_000723      CDS       T07002                                 
Name
(RefSeq) uncharacterized protein
  KO
K14284  nuclear RNA export factor
Organism
bnn  Brettanomyces nanus
Pathway
bnn03008  Ribosome biogenesis in eukaryotes
bnn03013  Nucleocytoplasmic transport
bnn03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bnn00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    FOA43_000723
   03015 mRNA surveillance pathway
    FOA43_000723
   03008 Ribosome biogenesis in eukaryotes
    FOA43_000723
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bnn03019]
    FOA43_000723
   03009 Ribosome biogenesis [BR:bnn03009]
    FOA43_000723
Messenger RNA biogenesis [BR:bnn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     FOA43_000723
   mRNA cycle factors
    Stress granule specific factors
     FOA43_000723
Ribosome biogenesis [BR:bnn03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    FOA43_000723
SSDB
Motif
Pfam: RRM_9 TAP_C LRR_4
Other DBs
NCBI-GeneID: 62194124
NCBI-ProteinID: XP_038776978
Position
1:1566111..1567838
AA seq 575 aa
MVGVQIQGWRNASQQDLVNFISRKSRIILQNVQSNMSSGVLTAFVRSMKDAEELEKCSGI
RFAGDTLRIQIIDPVGISGDGRNQVTMNTISILRSFLRARYNASAKMLDLTNMVNDQTLV
QNGLFSSSTTSSKFFPALMKLATQDKMDVESINLSDNRLDDNCRYLTELALSYPKLKNLA
IGNNKISRLEFFNRLKNKFPYLRELIVSGNPLVANDNPTVLKGIVDIFPRLIIINGQQVR
DEAKVNALFNFPVVTKSMFFETPDLSKVAANFIAAYLNMWDGQRHDLLQLYTPDSQFSYQ
VDTTRVGDAPSGPMSSANGSAGSSWSHYLSHSRNLKRVSGARSRMIRLFVGTDAIGKAFQ
ALPKTQHSLQQNPNLYSMETISFPPLNGMQITLHGEFNETAHPEQPFPEHKSSNRGGRYN
NQSRGGSRLEKRSFDRAFVVIPGPGGSFIVASDMLLVKPYSGNLAWSEEQRPVSAPSAVA
VIPPVGLASNGVAVPGIGATSNMAPVALAPNQIFPPDVAAKLSPEQQQLVLKIMHETRLN
LQFTIMLCEQSNWNYAAAGQNFANSKSQIPPQAYQ
NT seq 1728 nt   +upstreamnt  +downstreamnt
atggtgggagttcaaattcaaggatggaggaacgcttcacaacaggaccttgtgaatttt
attagcagaaaatcgagaatcatactacagaacgttcagtcaaatatgagcagcggtgtg
ttgacagcatttgttcgaagtatgaaagacgcagaggaattagagaaatgttcaggtata
agatttgctggtgacaccttaagaattcagattatcgatcctgtcggcatcagcggtgat
ggaagaaatcaggttacgatgaacacgatatcgattcttcgctcctttcttagagctaga
tacaatgcttctgctaaaatgttggatttaaccaatatggtgaacgatcagacgttggtt
caaaacggtctcttttcctcatctactacttcatccaagttctttcccgctctgatgaag
ttggccactcaggataagatggatgttgagtctataaatttgtctgacaaccgtttggat
gacaattgcagatacctaacagagttggccttgagttatcccaagttgaagaatctggct
atcggcaacaacaagatttcccgcttggaatttttcaacaggctaaaaaataagttccca
tacttaagggagttgattgtgtccggaaacccgttggttgccaatgacaatcctactgtt
ttgaaaggtatagtagacatctttcctcgactaattataataaatggacagcaagttaga
gacgaggcaaaagttaatgccttgttcaacttccctgttgttacgaagtcaatgttcttt
gaaacaccagacctgtccaaggtagctgccaatttcatagcagcatatctcaatatgtgg
gatggtcaaagacatgatcttctgcaattgtacactcctgactctcagttttcttatcag
gtggataccactcgtgtgggagatgcaccttccgggccaatgagttctgcaaatgggtcg
gctggctcgagttggtctcactacttatcgcactctagaaatttaaagagggtctctggg
gccagatcccgcatgattagattatttgtgggtacagatgccattggtaaggcatttcaa
gcgttgcccaagacacagcattcactacagcagaatccaaacctttattctatggagact
atctctttccctcctcttaacggaatgcaaataactcttcacggtgagttcaacgagact
gctcatcctgagcagccgttccccgaacataaatcgtctaacagaggcggcagatacaat
aaccaatccagggggggaagtcgccttgaaaaaagatcatttgacagggctttcgtcgtt
attccaggtcctggaggaagctttattgtggcttctgatatgttactcgttaagccatat
tcaggtaaccttgcttggagtgaggaacagagaccagtttctgcgcctagcgccgtcgct
gttattccaccggttggtctggcaagtaatggagtggccgttcccggtattggtgcaact
tctaatatggctcccgttgccttggcaccaaatcagatatttcctcccgatgtggctgcc
aagttgagtcccgagcagcaacaactcgtgttaaaaattatgcacgagacaaggttgaac
ttgcagtttactattatgctctgtgagcagagtaattggaactatgccgccgctggtcag
aattttgccaactcgaaaagtcaaatccccccacaggcgtaccaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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