KEGG   Brettanomyces nanus: FOA43_002755
Entry
FOA43_002755      CDS       T07002                                 
Symbol
POL3
Name
(RefSeq) DNA-directed DNA polymerase delta
  KO
K02327  DNA polymerase delta subunit 1 [EC:2.7.7.7]
Organism
bnn  Brettanomyces nanus
Pathway
bnn03030  DNA replication
bnn03410  Base excision repair
bnn03420  Nucleotide excision repair
bnn03430  Mismatch repair
bnn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bnn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FOA43_002755 (POL3)
   03410 Base excision repair
    FOA43_002755 (POL3)
   03420 Nucleotide excision repair
    FOA43_002755 (POL3)
   03430 Mismatch repair
    FOA43_002755 (POL3)
   03440 Homologous recombination
    FOA43_002755 (POL3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bnn03032]
    FOA43_002755 (POL3)
   03400 DNA repair and recombination proteins [BR:bnn03400]
    FOA43_002755 (POL3)
Enzymes [BR:bnn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FOA43_002755 (POL3)
DNA replication proteins [BR:bnn03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    FOA43_002755 (POL3)
DNA repair and recombination proteins [BR:bnn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      FOA43_002755 (POL3)
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     FOA43_002755 (POL3)
SSDB
Motif
Pfam: DNA_pol_B DNA_pol_B_exo1 zf-C4pol DNA_pol_B_2 divDNApol
Other DBs
NCBI-GeneID: 62196156
NCBI-ProteinID: XP_038778966
Position
3:230977..234285
AA seq 1102 aa
MSDSTHPPPFPEKSPLKRRHIDLSVDSGVGFESAHALPIANQSIEPHGFHMPTKGSFSTL
KLHKKLTSSQVDNEPSTFEKELINMSKNKSLDADGNLTTDQVWERPKLPSFDPDSYDIEF
QQLDADETIIRGCSAARFFGVTGEGYSVLCNVIGFRHYFYAPVPKGFTADDVKEFRRYLS
SNYAGIVDIRISKKESIWGFNNNVKLPFFKVVVDNSKHIGRIRSGFERGEVQFKGLFQPG
GQMTFDNVQYLLRLMVDCHIVGMGWLTAPKGKYTVMSSSEKVSTSQIEININYKDLISHP
SEGKYLNTAPLRIMSFDIECSGRKGIFPEPEHDSVIQIANVVSKVGEKVPFVRNVFTVDT
CSRIVGSDIFSFEKEQDMLMAWKEFMVKLDPDVIIGYNICNFDLPYLLNRAITLRLDNFP
FFGRLKNSRQEVRDTVFSSRAYGTRESKSVNIEGRMQLDLFQFIQREYKLRSYTLNAVSS
HFLGEQKEDVEHSIITDLQNGTTENRRRLAVYCLKDAYLPLRLLEKLMCLVNYTEMARVT
GVPFSYLLSRGQQIKVISQLFRKCLALDVVIPNMKNEGVNEEYEGATVISPIRGYYDVPI
ATLDFASLYPSIMLAHNICYTTLVNRDTIERLQLKENEDYEISPKGDCFVTSKQRLGILP
TILKELLTARKKAKKDMKTETDVFKKQVLNGRQLALKISANSVYGFTGATIGKLPCLSIS
SSVTAWGRKMIDKTKCTVMEKYSIKNGFPYDSQVIYGDTDSVMVKFGYPDMETCMKLGQE
AADYVSSKFKNPIKLEFEKVYFPYLLINKKRYAGLWWTKLDKFDKMDTKGIESVRRDNCR
LVQNVVTRVLELILEDRNVPAAEEFVKKTIADLLQNRVDLSQLVITKQLSRQDYAAKQPH
VELANRMRKRDPGSAPTVGDRVAYVIIKAAGERNWEKSEDPLFVLENSLPIDTKYYLENQ
LSKPLIRIFEPILGERKAHDLLTGSHTRTVHISSGKTGGLMRFTRKSNTCRSCKSAIPED
QMLCANCKGKSAEYYAKELASMNALEVKFDRLWTECQRCQGSLHQEVLCTNKDCPIFYMR
KKCQKDVLAQSEELKKWNSITW
NT seq 3309 nt   +upstreamnt  +downstreamnt
atgtccgatagcacgcatccaccaccgtttccagagaaatcgcctttaaaaaggaggcac
atcgatttgtctgttgattcgggcgttggcttcgaatcagcacatgctttgcctatagca
aaccaatcaattgaacctcatggtttccatatgcctacaaagggctccttttccacgttg
aaactacataaaaagctaacgtcatcacaggttgataacgaaccttcaacgtttgaaaaa
gaactcattaatatgtcgaagaacaagtctctcgatgcggatggaaatttgaccactgat
caagtctgggagcgtcccaaattgccctcttttgatcctgatagctatgacatcgaattt
caacagttggatgctgacgagactattattagaggctgctctgctgcacgattctttggt
gttactggggaaggatactctgttttgtgtaacgttattggcttcagacattacttctat
gcccctgtacccaagggattcaccgctgatgatgtcaaggaatttagacggtatttgtct
tcgaattatgcaggaattgttgacattagaatcagtaagaaggaatcaatatgggggttc
aacaataacgttaagcttccatttttcaaggtggttgtcgataactcgaagcatattggt
aggattcggtctggtttcgaacggggggaggttcaatttaagggactttttcagccggga
ggtcaaatgacctttgataatgtacaatatttattgagacttatggtggactgccatatc
gttggtatgggttggttgacggctcctaagggtaagtatacggttatgtcttcttctgag
aaggtgagtacttctcagattgagatcaacattaactacaaagacttgatatcgcaccct
tctgagggtaagtatcttaatacggcacctttacgtatcatgtcgtttgatattgaatgc
tcgggaagaaaagggattttccctgagccagaacacgactcggtaattcaaattgccaac
gtggtttcaaaagttggagaaaaagtgccctttgttcgtaatgtgttcactgtagacact
tgttctcggatcgttggctccgacatcttttccttcgaaaaagaacaggatatgctcatg
gcatggaaggaattcatggtgaaacttgatcccgatgtgatcattggctataatatttgc
aactttgacttgccctatttattaaaccgtgccattaccttacgtctggataacttccca
tttttcggccgtctcaagaacagtcgacaagaagttagagatactgtcttcagttcacgt
gcttacggtactcgtgaaagtaaatcggtgaacattgaaggtcgtatgcagcttgattta
tttcaattcattcagcgtgagtataagctaaggtcgtataccttgaatgcggtttcgtcc
cattttcttggggagcaaaaggaagatgtggaacattcgattattaccgatttgcagaac
ggtaccacggaaaatcggcgtcgtttggccgtctattgtctgaaggatgcatacttgccg
ctccgtttacttgagaaacttatgtgcttagttaattacacagagatggctcgtgttaca
ggtgttccgttttcgtacttgctttctagaggtcagcagatcaaggttatttctcagctt
ttcagaaagtgcttggccttggatgtagtgattccgaacatgaagaatgaaggggtcaat
gaagagtatgaaggcgcaacggttatttctcctatcaggggttactacgatgttcccatt
gctacgcttgattttgcgtctttatatccgtccatcatgttggcccataacatttgctac
actactttagtgaaccgtgataccattgaaagactccagttgaaggagaacgaggactac
gagatttctcccaagggtgattgctttgttacttctaagcagaggctgggaattcttcct
acaattctcaaagaacttcttacagccagaaagaaggccaaaaaggatatgaagaccgag
acggatgtttttaagaagcaggttttaaacggtagacagttggcattgaaaatatctgcc
aattctgtgtacggctttactggtgccaccattggtaagcttccctgcctttccatctca
tcgtctgttacggcctggggtcgtaagatgattgacaagactaagtgtactgttatggag
aaatattccattaagaatggattcccatacgattcgcaggttatttatggtgacaccgat
tctgtgatggtgaaatttggatatccagatatggagacgtgcatgaagttgggacaggag
gcagccgattacgtttcatcgaagttcaagaaccccatcaagttggaatttgaaaaagtc
tactttccttatcttcttatcaacaagaagagatatgctggtctttggtggacgaagttg
gataaattcgataagatggataccaagggaatcgagtctgttcgtagagataactgtcgt
ttggtgcagaatgttgtgactcgagttttagagcttatcttggaagatcgtaacgttccg
gctgctgaagagtttgttaagaaaaccattgctgatcttcttcagaatcgtgtggatttg
tctcaattggtgattaccaaacaactttcgcggcaggactatgcggccaaacagccccac
gtggagttggcaaatagaatgaggaagagagatcctggctctgcccctaccgtgggagat
agagtggcatacgttattatcaaggcagcaggagagagaaactgggagaaatccgaggac
ccattgtttgtgttggagaactctttaccgatcgacacaaaatattacttggaaaaccag
ctttcgaagcctctaatcaggattttcgagcctattctgggagagagaaaggctcacgat
ttacttactggatcccatactcgtacggttcacatttcctcgggtaaaactggtggtctt
atgagatttactcggaaatccaacacctgtcgatcgtgcaaatcggccatacctgaagat
cagatgctttgcgccaattgtaaaggtaagagtgccgaatattatgccaaagagcttgca
tctatgaatgcattggaggtgaagttcgataggttgtggacagagtgccagcgatgtcag
ggatctcttcatcaagaagttctttgcaccaacaaggactgtccaattttctacatgcgg
aagaaatgccagaaggatgtcttggctcaatctgaggaattgaaaaagtggaatagtatc
acttggtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (5)   
   KEGG PATHWAY (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

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