KEGG   Burkholderia oklahomensis C6786: BG90_398
Entry
BG90_398          CDS       T03861                                 
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
boc  Burkholderia oklahomensis C6786
Pathway
boc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:boc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BG90_398 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:boc03019]
    BG90_398 (pnp)
   03016 Transfer RNA biogenesis [BR:boc03016]
    BG90_398 (pnp)
Enzymes [BR:boc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     BG90_398 (pnp)
Messenger RNA biogenesis [BR:boc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BG90_398 (pnp)
Transfer RNA biogenesis [BR:boc03016]
 Prokaryotic type
  tRNA degradation factors
   BG90_398 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase S1 KH_1 KH_2 KhpA-B_KH UPF0181
Other DBs
NCBI-ProteinID: AJX32177
UniProt: A0A7U4ZS99
Position
I:complement(427189..429333)
AA seq 714 aa
MSLFNKVVKEFQWGQHKVRLETGEIARQASGAVLVDIEDTVVLATVVGAKSAKPGQDFFP
LTVDYIEKTYSAGKIPGGFFRREGRPSEHETLTSRLIDRPLRPLFPEGFYNEVQVVIHVL
SVNPEVPADIPALIGASAALAVSGLPFNGPVGAARVAYVNNEYVLNPTREQIKASRLDLV
VAGTERAVLMVESEAQQLPEDVMLGAVVFGHEQMQTAIDAIHELVREGGKPEWNWQPAAK
NEALIARVTELAQADLQAAYQIREKQSRSTKLKEVYAAATAKLAEEAAASNAEAADAATV
GNILFDLEAKIVRSQILNGEPRIDGRDTRTVRPIEIRTGVLPRTHGSALFTRGETQALVV
ATLGTKGDEQIIDALEGEYRERFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALVA
CLPSADEFGYSIRVVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLILEGN
KFAVLTDILGDEDHLGDMDFKVAGTADGVTALQMDIKIQGITKEIMQVALAQAKEGRMHI
LGKMTEAVAGANTQLSEFAPRMITIKINPEKIRDVIGKGGSVIRALTEETGTTIDISDDG
VVTIASTNSEGMAEAKKRIENITAEIEVGQVYEGTVLKLLDFGAIVNLLPGKDGLLHISE
IVNERVKDINDYLKEGQQVKVKVIQTDEKGRVRLSAKALLNEAAAHQTDTPPQQ
NT seq 2145 nt   +upstreamnt  +downstreamnt
atgtctctgttcaacaaagtcgtgaaggaattccagtggggccagcacaaggtgcgcctc
gaaaccggcgagatcgcgcgccaggctagcggtgccgtgctcgtcgacatcgaggacacc
gtcgtcctcgcgacggtcgtcggcgcgaagtcggcgaagccgggccaggatttcttcccg
ctcaccgtcgactacatcgagaagacctactcggcgggcaagatcccgggcggcttcttc
cgccgcgaaggccgtccgtcggagcacgagacgctgacgtcgcgtctcatcgatcgcccg
ctgcgcccgctcttcccggaaggcttctacaacgaagtgcaggtcgtgatccacgtgctg
tcggtgaacccggaagtcccggccgacatcccggcgctcatcggcgcgtcggctgcgctc
gccgtgtcgggcctgccgttcaacggccccgtcggcgccgcgcgcgtcgcgtacgtcaac
aacgaatacgtgctgaacccgacgcgcgagcagatcaaggcgtcgcgcctcgacctcgtc
gtcgcgggcacggagcgtgccgtgctgatggtcgagtcggaagcccagcaactgccggaa
gacgtgatgctgggcgccgtggtgttcggccacgagcagatgcaaacggcgatcgacgcg
attcacgaactcgtgcgcgaaggcggcaagcccgaatggaactggcagccggccgcgaag
aacgaagcgctgatcgcgcgcgtgaccgagctcgcgcaagccgacctgcaggcggcctac
cagatccgcgaaaagcagtcgcgctcgacgaagctgaaggaagtctacgcagccgccacc
gcgaagctcgcggaagaagcggcggcgtcgaacgccgaagccgccgacgcggcgacggtc
ggcaacatcctgttcgatctcgaagcgaagatcgtccgctcgcagatcctgaacggcgag
ccgcgcatcgatggccgcgacacgcgcaccgtgcgcccgatcgagatccgcacgggcgtg
ctgccgcgcacgcacggctcggcgctcttcacgcgcggcgagacgcaggcgctcgtcgtc
gcgacgctcggcacgaagggtgacgagcagatcatcgacgcgctcgaaggcgaataccgc
gagcgcttcatgctccactacaacatgcctccgttcgcgaccggcgaaacgggccgcgtc
ggttcgccgaagcgccgcgaaatcggccacggccgcctcgcgaagcgcgcgctcgtcgcg
tgcctgccgagcgccgacgaatttggctactcgatccgcgtcgtgtcggaaatcaccgag
tcgaacggttcgtcgtcgatggcgtcggtgtgcggcggctgcctcgcgctgatggacgcg
ggcgtgccgatgaaggcgcacgtcgcgggcatcgcgatgggcctgattctcgaaggcaac
aagttcgcggtgctgaccgacatcctcggcgacgaagatcacctcggcgacatggacttc
aaggtggccggcacggccgacggcgtgaccgcgctgcagatggacatcaagatccagggc
atcacgaaggaaatcatgcaggtcgcgcttgcacaggcgaaggaaggccgcatgcacatc
ctcggcaagatgacggaagcggtcgccggcgcgaacacgcagctgtccgaattcgcgccg
cgcatgatcacgatcaagatcaacccggaaaagatccgcgacgtgatcggcaagggcggc
tcggtgatccgcgcgctgaccgaagaaaccggcacgacgatcgacatctcggatgacggc
gtcgtgacgatcgcgagcacgaacagcgaaggcatggccgaagcgaagaagcgcatcgag
aacatcacggccgagatcgaagtcggtcaggtgtacgaaggcacggtgctgaagctgctc
gatttcggtgcgatcgtgaacctgctgccgggcaaggacggcctgctgcacatctcggaa
atcgtcaacgagcgcgtgaaggacatcaacgactacctgaaggaaggccagcaggtgaag
gtcaaggtgatccagacggacgagaagggacgcgtgcgtctgtcggccaaggcgctgctg
aatgaagcagccgcccaccagacggatacgccgccgcagcagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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