KEGG   Brassica oleracea (wild cabbage): 106293308
Entry
106293308         CDS       T04124                                 
Name
(RefSeq) polyadenylate-binding protein 6
  KO
K13126  polyadenylate-binding protein
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03015  mRNA surveillance pathway
boe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    106293308
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106293308
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:boe03019]
    106293308
   03041 Spliceosome [BR:boe03041]
    106293308
Messenger RNA biogenesis [BR:boe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     106293308
   mRNA cycle factors
    Stress granule specific factors
     106293308
Spliceosome [BR:boe03041]
 Complex C
  Other components
   Complex C specific factors
    106293308
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 106293308
NCBI-ProteinID: XP_013584425
UniProt: A0A0D3CJM4
Position
C5:38668847..38671369
AA seq 570 aa
MAAIVKTEMQPVGNSQSSSLASLYVGDLSPDVTEADLTAKFSLTVPVVSAHLCRDSVTGK
SLRYAYVNFDSAITASNAMACLNHTDLKGKTMRIMWSQKDVAYRRRSGLGNLFVKNLDSS
ITSSCLERMFSPFGVILSCKVAEENGQSKGFGFVQFATEQSAVAARLASHGSMVDGKKLF
VAKFINRDERAAMSGNQEFTNVYVKNLLESVTEDFLHTMFSQCGTVSSVVVMRDGMGRSR
GFGFVNFCHPENAKKAVETLNGQPHGSKKLFAGRALRKAERMEMLKQKHKDNFVAKFNVG
WFNLYVKNLTESMGETKLREIFGSYGKIVSAKVMRDENGKSKGFGFVAFSTLDESKHAKR
ELHGFIVDGQSLVVRVAERKEDRFKRMQKYHPVQSRHYMQAAPVPSPAQPVPPSMEYKQY
YGVQPRNYTQALPVPSPAQPVPPPSMSSSPYGYLQPFHIGAYYYPMATQLPQMSGHQNLT
TYVPAGQAHLKEKRSVQLVYKRPGYTTFVKSGAKQKLVFKGQGDKNLEAGTCSTKAKTSA
EKRKEVSSHLMAMLTPNRNAAQNLATLEVA
NT seq 1713 nt   +upstreamnt  +downstreamnt
atggcggcgatcgtgaaaacggaaatgcaacccgtaggaaacagccagtcctcgagcctc
gcttcgctttacgtcggcgatcttagccccgacgtgacggaggctgatctcaccgccaaa
ttctccttgactgtccccgtcgtctccgctcatctctgccgcgactccgtcaccggaaaa
tcactgcgttacgcttacgtcaacttcgactcagccatcaccgcgtcgaacgctatggcg
tgcttgaaccacaccgatttgaaggggaagacgatgcggataatgtggtctcagaaagat
gttgcgtaccgtcgtcgtagtggattggggaatctcttcgttaagaatcttgacagctcc
atcactagcagttgcttagagcggatgtttagtcccttcggagtcatactttcttgcaaa
gtcgctgaggagaatggccaaagtaaaggcttcggttttgttcagtttgctacggagcaa
tctgctgttgctgctcgtcttgcctcccacggatctatggttgatggcaagaaactgttt
gtggctaagttcattaacagggatgaaagagctgctatgtctgggaatcaagagttcaca
aacgtttatgtgaagaatctgctcgagagtgttacagaggattttctccataccatgttt
tctcaatgtgggacggtctctagtgttgtggttatgagggatggtatgggaagatccaga
ggtttcggatttgtcaacttctgccatccagagaatgcaaagaaagctgtggaaactctc
aatggacaaccacatggttcgaagaagttgtttgctggaagggctttgagaaaagctgaa
aggatggagatgctgaaacagaaacacaaagacaactttgttgccaagttcaatgttggt
tggtttaatctgtacgtgaagaacttgaccgaatcaatgggcgaaacaaagctgcgagag
atatttggaagctatgggaagatagtttcagcaaaagtgatgcgtgatgaaaatggcaaa
agtaaaggattcggctttgtggctttctctacccttgacgagtccaaacatgctaaaaga
gagctccacggatttatagtggatggacagtcacttgttgttcgagttgctgaacgtaag
gaggatcgcttcaagaggatgcagaaatatcatccagtacaatctcgccattacatgcaa
gctgctcctgtcccttcaccagctcagccggtcccgccatctatggagtacaagcaatat
tatggagtgcagccacgcaattacacgcaagctcttcctgtgccttcaccagctcagcca
gtcccaccaccgtctatgagcagcagcccatatggttacttgcagccattccatattgga
gcatactattaccctatggccactcagttaccacagatgtcgggtcaccaaaacttgacc
acctacgttcccgctggccaagctcatctgaaggagaaaagatcagttcaactagtctac
aaacgcccgggttacaccacctttgtcaagagtggtgctaaacagaaactggtctttaag
gggcaaggtgacaaaaatttagaggcaggcacttgctccaccaaagcgaagacatctgct
gaaaaacgtaaagaagtatcatcgcatttgatggcaatgttgacaccaaataggaatgct
gcacagaatttagcaacacttgaagttgcttag

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