KEGG   Brassica oleracea (wild cabbage): 106294099
Entry
106294099         CDS       T04124                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A-like
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03020  RNA polymerase
boe03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106294099
  09124 Replication and repair
   03420 Nucleotide excision repair
    106294099
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:boe03021]
    106294099
   03400 DNA repair and recombination proteins [BR:boe03400]
    106294099
Transcription machinery [BR:boe03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     106294099
  RNA polymerase III system
   RNA polymerase III
     106294099
  RNA polymerase I system
   RNA polymerase I
     106294099
DNA repair and recombination proteins [BR:boe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      106294099
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N DUF3557
Other DBs
NCBI-GeneID: 106294099
NCBI-ProteinID: XP_013585164
UniProt: A0A0D3CH99
Position
C5:31364218..31365545
AA seq 206 aa
MGLTEEEIKRIYRIQKTLMQMLKDRGYFIADSEITMTLSQFVRKHGDNMKREDLVTLRAK
RNDSSDQLYVFFPDEVKVGINTMKVYTNRMKSENVYRAILVVQQNLTPFARNCISQISSK
FHLEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFG
LKRGQVVKIIRPSETAGRYVTYRYAV
NT seq 621 nt   +upstreamnt  +downstreamnt
atgggtctaacggaagaagaaatcaaaagaatatacagaatccagaagacgttgatgcag
atgctcaaggaccgtggctactttatcgccgattctgaaatcacgatgaccctatcacag
ttcgttaggaagcatggggacaacatgaaaagggaggatcttgttactctcagagctaag
agaaacgatagcagtgatcagctctatgtcttcttccctgatgaggtgaaagttggaatt
aacacaatgaaagtgtacacaaaccggatgaagtcagagaatgtttacagagctatcttg
gttgttcagcagaacttgactccttttgctcgaaactgcattagtcagatctcttctaaa
ttccatctcgaagttttccaggaggcggaaatgctagtgaatattaaggaacatgttctt
gttcctgagcaccaagttctcaccactgaagagaagaaaactttactggagagatacact
gtcaaggagactcagcttccaaggattcaagtgactgatccaatcgcaagatactttgga
ctcaaacgtggccaagtcgtcaagatcatccgtcctagtgaaaccgctggtcgttacgtt
acctatcgttatgctgtataa

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