KEGG   Brassica oleracea (wild cabbage): 106296598
Entry
106296598         CDS       T04124                                 
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 45 homolog
  KO
K12479  vacuolar protein sorting-associated protein 45
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:boe00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    106296598
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:boe04131]
    106296598
Membrane trafficking [BR:boe04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab associated proteins
    106296598
SSDB
Motif
Pfam: Sec1 IFT20
Other DBs
NCBI-GeneID: 106296598
NCBI-ProteinID: XP_013588224
Position
C6:complement(26036849..26039911)
AA seq 426 aa
MASNHLYMIPAVVDPSGLQRYSDRVVDGIAAVFLALKRRPVIRYQRTYDTAKRIAHETAK
LMYQHESGLFDFRRTESSPLLLVIDRRDDXPLLNQWTCQAMVHELIGLQDNKVDLRAIGS
LSKDQQVEVVLSSEQDAFFKSNMYENFGDIGMNIKRMVDDFQQVAKSNQNIQTVEDMARF
VDNYPEYKKMQGNVSKHVTLVTEMSKLVEARKLMLVSQTEQDLACNGXQGAAYEAVTDLL
NNENVSEIDRLRLGMLYALRYEKENPVQLMQLFNKLASRSPKYKPGLVQFLLKQASVEKR
TGDLFGNRDLMNIARNMARGLKGVENVYTQHQPLLFQTMESRTRGRLRDVDXPFAGDHFQ
HGLPQEVVIFMVGGTTHEESRSVALQNATNSGIRFILGGTAVLNSKRFLMDLEEAQRISR
SGSHMV
NT seq 1281 nt   +upstreamnt  +downstreamnt
atggcatcaaaccacctatatatgatcccagcagttgtcgatccctctggtttgcaacgc
tactcggatcgggttgttgatggaattgcggcggtgtttctggctttgaaacgtagacct
gtcatcagataccagaggacctatgatactgcaaaaaggattgcacacgaaacagcgaaa
ttgatgtatcagcacgaaagcggtcttttcgattttagacggactgaaagctctccgttg
ctgcttgtaattgacagaagagatgacnncccattgctcaatcagtggacatgtcaggcg
atggtgcatgaactcataggacttcaggataataaagtagacttgagagctattggaagt
ctttcaaaagatcagcaagttgaggtggttttatcatcagaacaagatgcattcttcaaa
tctaacatgtatgaaaattttggggatatcggaatgaacatcaagcgaatggtggatgac
tttcagcaggtggcaaagagtaaccaaaatatccagacagtagaggacatggccagattt
gttgacaattaccctgagtacaaaaaaatgcaaggcaacgtgtcaaagcatgtaaccctg
gttactgaaatgagcaagctagttgaagcaaggaaactgatgctggtttcacaaacagag
caggatttggcttgcaatggtngccaaggagctgcatatgaggcagttactgatctctta
aataacgaaaatgtgtctgaaatcgaccggctacgtttgggaatgctgtatgctctgcgc
tatgagaaagagaatcccgttcagttgatgcaactgttcaacaaattggcttcaaggtct
cctaagtacaaaccagggcttgttcagtttctattgaagcaagccagtgtggagaagcgt
actggtgatctatttggaaacagagatcttatgaatatagcacgcaacatggctcgtgga
cttaagggggttgagaatgtgtacactcaacaccagcctcttctgtttcaaacaatggag
agcagaaccagagggagattacgagatgtggactaaccttttgctggagatcattttcaa
cacggactgccacaagaggtggtgatattcatggttggtggaacaacgcacgaggaatca
cgctctgttgctcttcaaaatgccaccaactctggcattcggtttattctcggcggcacc
gcagtgcttaattccaaaagatttctaatggacttggaagaagcacaaaggatatcaaga
tcaggtagccatatggtgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system