KEGG   Brassica oleracea (wild cabbage): 106297743
Entry
106297743         CDS       T04124                                 
Name
(RefSeq) rhamnogalacturonate lyase-like
  KO
K18195  rhamnogalacturonan endolyase [EC:4.2.2.23]
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    106297743
Enzymes [BR:boe01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.23  rhamnogalacturonan endolyase
     106297743
SSDB
Motif
Pfam: Rhamnogal_lyase CBM-like fn3_3 CarboxypepD_reg RhgB_N Y_Y_Y
Other DBs
NCBI-GeneID: 106297743
NCBI-ProteinID: XP_013589377
Position
C6:22166597..22171016
AA seq 661 aa
YVLIFVLPGVFRTSRNKLGIAKPEQKLASGRLTLKKVGPNQVVVDNGIIQVTFSSPQGLI
TGIKYKGFDNVLNNKIKNRGYWDVMWYEPGQEQLIDLLEGVKFNVINQTSEHVEISFSRA
WKISQRGSLVPLNVDKRYIIRRGVSGIYMYAVLEKLKGWPTVDMDQTRIVFKLNTKFDFM
AISDQRQKIMPSEIDRDITNKRANPLAYKEAVRLINPQNRIFKGQVDDKYMYSMENKDNK
VHGWISSDQRVGFWMITPSDEFRVCGPPKQELTSHVGPTTLSMFTSLHYAGKDMNTTYTS
MEPWKKVYGPVFVYLNSASSPNRLWTDAKRQMVAEVHSWPYDFVKSVDYPLHQQRGTVKG
QFFVMDRYISNKSKLFGKFAFVGLAMPGKAGSWQTENKGYQFWTTADRMGIFTITNVRPG
SYNLYAWVSGHIGDYKYERDITITPGREIDVGAILYEPPRIGATLWEIGKPDRTAAEFYI
PDPDPTLSTKLYLNNSYQPQDRFRQYGLWDRYTALYPRNDLVYIVGVSDYKKDWFYAHVT
RNAGNGTYQATTWQIVFRLKAVIKTGNYTFRMALAAVTTANLSVRINVPTSKPIFMIGLI
GQDNAIARHGIHGLYNLYDINVGGNLLRVGNNTIFLTQDRRWGSFTGVMYDYLRLESPQE
V
NT seq 1986 nt   +upstreamnt  +downstreamnt
tacgttctaattttcgttcttccaggtgttttcagaacgtcaagaaacaagttaggcatc
gcaaagccggaacagaagctcgcatctggccgacttacgcttaaaaaagttggtcctaat
caagtggtcgttgataacggtatcatccaagttaccttctcaagtccacaaggtttaata
actggaatcaagtacaagggctttgacaatgtgttgaacaacaaaattaaaaatcgtggg
tattgggacgtaatgtggtatgaaccaggacaagaacaacttatcgatcttttagaagga
gtaaaattcaacgtcataaatcaaacaagtgagcatgttgagatttcattttcacgagct
tggaagatttctcaacgtggctcactggtcccgttaaatgtagacaaacgatatataatt
cgaagaggggtatctggaatatacatgtacgctgtgttagagaagttaaaaggctggcca
actgtggacatggaccaaaccaggatcgtcttcaagcttaacacaaaatttgattttatg
gctatatctgatcaacggcaaaaaattatgccttctgaaatcgatcgagatattactaat
aagcgtgctaatccattagcttataaagaagctgttcgtttgataaatccccaaaatcgt
atatttaaagggcaggttgacgataagtatatgtactcgatggaaaacaaagacaacaaa
gtacatggctggatctcgtccgaccaacgtgtcggcttctggatgattactcccagcgat
gagtttcgtgtctgtgggccccccaaacaagaactaacttctcatgttggacccaccaca
ctctccatgtttacaagtttacattacgcggggaaagatatgaacacaacttatacaagc
atggagccgtggaagaaggtgtatggtcctgtctttgtttatctcaactctgcctcctct
cctaatcgtctctggaccgatgctaaacgacagatggttgcggaggttcatagttggcca
tatgatttcgtgaagtcagtagattaccctcttcatcaacaaagagggacggtcaaaggt
caattctttgtaatggacagatacataagcaacaagtcgaagttatttgggaaatttgct
tttgtgggtttagcaatgcccggtaaagctggttcatggcaaaccgaaaacaagggatat
caattttggacaacagctgacagaatggggatattcacaataacgaatgtgagaccaggg
agttataatctatatgcatgggtttctggacatattggtgactataaatacgagcgtgac
attaccatcacaccaggcagggagatagacgtaggagccatactgtatgagccgcccaga
atcggcgctacactgtgggaaatcggaaaaccagaccggactgctgcagaattctatatc
ccagatccggacccaaccctttcgaccaaactctatcttaataactcttatcaacctcaa
gaccgatttagacaatatggtctatgggatcggtacactgctttgtatcctcgaaatgat
cttgtttatattgttggagtaagtgattataaaaaagactggttctatgcacatgtgacc
agaaatgctggaaatgggacatatcaagcaacgacatggcaaattgtgtttagattgaaa
gcagtgattaaaactgggaactacacgtttcgaatggctttggctgcagtcacgactgca
aatttatctgttcggatcaacgtacctacgtccaaacctattttcatgattgggctaata
ggtcaagataacgcgatcgctagacatgggattcatgggttatacaacttgtatgatatc
aatgttggtggaaacttacttagggttggtaataatacgatttttctcactcaagatcgg
agatggggatcgtttacaggtgttatgtatgattatctacgtctggaaagtcctcaggaa
gtttga

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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