KEGG   Brassica oleracea (wild cabbage): 106301381
Entry
106301381         CDS       T04124                                 
Name
(RefSeq) histone deacetylase 5-like
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:boe03036]
    106301381
Enzymes [BR:boe01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     106301381
Chromosome and associated proteins [BR:boe03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     106301381
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 106301381
NCBI-ProteinID: XP_013593215
UniProt: A0A0D3DDI0
Position
C7:complement(38435744..38439125)
AA seq 647 aa
MAMAGESSNNNYRDCDGKSHRKVGLVYDETMCKHDTPNGEDHPECPDRIRVIWEKLQLAG
VSQRCVVFGGSKAEDKHLQLVHTKDHVSVVKSLSTKKKDYRRNRIASQWNSIYLNGSSSE
AAFLAAGSVVELAEKVAEGELDCGYAIVRPPGHHAEPDEAMGFCLFNNVAVAASYLLDER
PELGVKKILIVDWDVHHGNGTQKMFWKDPRVLFFSVHRHEHGGFYPAGDDGDYNMVGEGP
GEGFNINVPWEQGRCGDADYLAAWDHILIPVAKEFNPDIILLSAGFDAAIGDPLGGCRVT
PYGYSVMLKKLMEFAKGKIVLALEGGYNLDSIAKSSLACVQVLLEDKPIQGSSEAYPFES
TWRVIQAVRKKLSAYWPSLADVLSSKLIDQKTPTPIIVFSSSDSETEDYADDILDQMSRL
NIENHHVDTVSTSWRRDLSKVDVWYASFGSNMWKPRFLCYIQGGQVEGMKKVCVGSMDKT
PPKQIMWESFPHRLFFGRESSVTWGVGGVAFINPLTNLNDQTHMCLYRITLEQFNDVLFQ
ENGLKVDSDSPLFGLDTLQLVEKKGSIPLASGGWYGNIVCLGKECDIPILTMTCTLSAVE
KFKSGEIPLRPPSEAYANTMIRGLVEGGRLSEEEAKAYIHNAASKPL
NT seq 1944 nt   +upstreamnt  +downstreamnt
atggcaatggccggtgaatcttctaataacaactacagagactgtgacgggaagagtcat
cgaaaggtgggtcttgtctatgacgagacgatgtgcaaacacgacacacctaacggcgag
gatcaccctgagtgtcctgatcgcatcagagttatctgggagaagctccagctcgccgga
gtctctcaaagatgtgtggtttttggtggtagcaaagctgaagacaagcatctccaattg
gttcacacaaaggaccatgttagtgtagttaagagtttaagcacaaagaagaaagattac
cggagaaacaggattgcttcacagtggaattcaatatatctgaatggaagttcatctgaa
gccgcgtttcttgcagctggatctgttgtagagttggcggagaaagttgcagaaggagag
ttggattgtgggtatgctattgtcaggcccccagggcaccatgctgagccagatgaagct
atgggtttctgtttgttcaacaacgtagcagtcgctgctagctatttacttgatgaaaga
cctgaactaggtgtcaagaagattctgattgttgattgggatgtccatcatggaaatggc
acgcagaagatgttctggaaagatcctcgtgtactgtttttctctgttcacaggcacgaa
cacggaggcttctatccagcgggtgatgatggagactacaacatggttggggaaggtcca
ggtgaagggtttaacataaacgttccatgggaacaaggaagatgcggagatgcagattat
cttgccgcatgggaccatattttgattcctgtggcgaaggagtttaatcctgatattatt
ttgttatcagctggatttgatgcagctattggtgatccacttgggggctgtcgtgtaaca
ccatatggatattcagttatgttgaagaagctgatggagtttgcaaaaggaaagattgtg
ttggcgttagagggagggtacaatcttgactcaattgcaaagtcttcactggcatgtgtc
caagtcttgcttgaagacaaaccaattcaaggttcttctgaagcatacccattcgagtct
acatggcgtgtcatacaagcggtacgaaagaagctgtctgcatattggccttcacttgca
gatgtattatcatcgaagctcattgatcagaaaactcccactccaattattgttttctca
agctccgactctgaaactgaagactacgctgatgatatcctagatcaaatgtcgagactc
aacattgaaaaccaccacgtagatacagtttctacatcttggagaagagatctctcaaaa
gttgatgtctggtatgcctcttttggatccaacatgtggaaaccaaggttcctttgctat
attcaagggggacaagtagagggaatgaaaaaggtctgcgttggttcaatggataaaact
ccaccaaagcaaataatgtgggaatcatttccacacaggctgttctttggacgtgaatca
tcagttacttggggtgtaggaggagttgctttcatcaacccacttactaatctcaatgat
caaactcacatgtgtttgtacagaatcacgcttgagcagttcaacgatgttctgtttcag
gaaaatggattgaaagtagattctgattctccgctctttggtctagatactctgcagtta
gtagagaagaaaggatccattccacttgcttcgggtggttggtatggaaacattgtctgc
ttggggaaagaatgcgacatccctatacttacaatgacttgcacactatctgctgttgag
aagttcaaatccggtgagatccctttaagacctccttcagaagcatatgcaaacactatg
ataagagggcttgttgaaggaggaagattatctgaagaagaagctaaagcttacatacac
aatgctgcatctaaacctctctag

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