KEGG   Brassica oleracea (wild cabbage): 106301746
Entry
106301746         CDS       T04124                                 
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 1 isoform X1
  KO
K15692  E3 ubiquitin-protein ligase RNF13 [EC:2.3.2.27]
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:boe04121]
    106301746
Enzymes [BR:boe01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     106301746
Ubiquitin system [BR:boe04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    106301746
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-rbx1 zf-C3HC4_3 PA zf-RING_5 zf-ANAPC11 Prok-RING_4 zf-RING_16 zf-RING_6 DUF3262 HemY_N
Other DBs
NCBI-GeneID: 106301746
NCBI-ProteinID: XP_013593667
Position
C7:complement(24729340..24731437)
AA seq 327 aa
MRDVIVCLLAAPFLLQLSTATVVLNSISTSFPHLPAKFDGSVPRNGICGALFVANPLDGC
SPLLPPSNSSLTKLALIIRGGCSFEDKLLHAQNSGFFQAAIVYDNLDNEDLVISKPQRYY
FFVESINFGFHICFCFFCTVKVNTQEITLAAAVFVSNVAGEILSKYARGREGECCIYPPT
KGTAWTVLAISFFSLLLIITFLLLAFFAPRHWTQWRGRHSNRTVSLDPKLVRTLPTFTFA
DSFHGGDTCAICLEDYRFGDSLRLLPCQHAFHLNCIDSWLTKWGTSCPVCKHDIRTQTMS
SEAQKRDSPRTGTSTGRFTSAQSSQSL
NT seq 984 nt   +upstreamnt  +downstreamnt
atgagagatgttattgtatgtctactcgcagctcctttcctcctacaattatcaactgcc
accgtcgtactcaattctatctccacctcttttcctcatctccccgccaaattcgacggc
tccgtccccagaaacggaatatgcggagctctgttcgtcgcaaatcccctcgacggttgc
tctcctcttctgcccccatctaacagttctcttactaagttggctcttatcatcagaggc
ggatgctctttcgaggataagcttctccacgcccagaactcgggtttttttcaagctgcg
attgtctatgacaacttagacaacgaagatctcgtcattagtaagcctcaaagatattac
ttctttgtagagtctatcaattttggattccacatctgtttttgttttttttgcacagtg
aaggtgaacactcaggagattacacttgctgctgcagtcttcgtttcaaacgttgccggc
gagatcttgagcaagtacgccagaggccgagagggcgaatgctgcatttatcctccaacc
aaggggactgcttggactgtcctcgccatctctttcttctctctcctactcatcattact
ttccttttgctcgccttctttgctccaaggcactggacccaatggcgaggcaggcacagc
aaccggaccgtgtcactagatccgaagctggtccgcacactccccactttcacctttgct
gattcttttcacggaggtgatacgtgtgccatatgcctcgaggattatagatttggagac
tcccttagactattgccctgccaacatgcttttcacttgaactgcatcgactcttggttg
acaaaatggggtacatcctgcccggtgtgcaagcatgatataagaacgcagactatgtct
tccgaggcacaaaaacgagatagtccaagaacaggtacaagtacgggtagatttacctct
gctcaatccagtcaaagcctttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (15)   
   Pfam (15)   
All databases (28)   

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