KEGG   Brassica oleracea (wild cabbage): 106305803
Entry
106305803         CDS       T04124                                 
Name
(RefSeq) probable DNA-directed RNA polymerase I subunit RPA2
  KO
K03002  DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106305803
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:boe03021]
    106305803
Enzymes [BR:boe01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     106305803
Transcription machinery [BR:boe03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     106305803
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpa2_4 RNA_pol_Rpb2_2
Other DBs
NCBI-GeneID: 106305803
NCBI-ProteinID: XP_013597647
UniProt: A0A0D3D5W1
Position
C7:16384056..16391860
AA seq 1188 aa
MVIKGKDTVPNTEDFKELRNLVTHHIESFDYMTEKGLDVMFTRINAVNVYDPSTENKWKI
SLENPKVFSPQKESLSSNSRKESLYPFECRQAKVSYMGALMADVCFQYDNGLGSGLGAVV
REKFEFGELPIMLMSNRCHLQGADCRKLLKCKESTSEMGGYFILNGIERVFRCVIAPKRN
HPTGMIRNSFTGKREGYSDKAVAIRCVRDDQSAVTIKVYYNRNGSARVGFWIGGREFLLP
VGLVLKALTETNDEEIYESLNRCYNEHYGRGDGSIGTQLVRERAKIILDEVRDLGLFTRE
QCRKYLGEHFKSDIDGLEKESYPVVAEAVLKNYIFVHLDNDDDKFNLLIFIIQKLFSLVD
QTSLPDNPDSLQNQEILVPGHLITIYLKEKLEEWLRKCKSTIEEEMRNVKSKFDFENHAD
IKKLMNRNQPRSIGTSIESLLKSGCMTTRSSLDLQQKVGYTVQAERLNFLRFLSFFRAVH
RGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTRTCRISSQFDSNGNIRDF
RKIRRSVVDVLVGIGMVTSLPKLVRAGPPKVIHVLLDGQVVGSLSSNLVPEVVAYLRRLK
VEAPSIIPEDLEVGYVPTSMGGSYPGLYLASCPARFIRPVKNTSIPSNNLELIGPFEQVF
MEISCPDGGNGGRNNSSLATHEEIDPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMA
YSTQALQFRADQKIYHLQTPQSPVVRTKTYTAYNIDENPTGTNAIVAVLAHTGFDMEDAM
ILNKSSVERGMCHGQIYQTEAIDLSDQKSRSGSGNKRFRRNNAVKSAHPCVDADGLPYVG
QKIYPNETYCSIYDGVTNDFKPMKRKGTDPVIVDFVSLDMKSKNHPQKANIRFRHARNPI
IGDKFSSRHGQKGVCSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKG
GSLRGEFVDATPFRDAVKKTNGEEESKSSLLVDDLGSMLKQKGFNHYGTETLYSGYLGVE
LKCEIFMGPVYYQRLRHMVSDKFQVRSTGMVDQLTRQPIKGRRRGGGIRFGEMERDSLLA
HGASYLLHDRLHTSSDHHIADVCSLCGSLLTSSVLNVQQKKLIREIGNLPPGRTPKKVTC
ASCKTSKGMETVAMPYVFRYLAAELASMNIKMTLQLSNSGEGSDSEGV
NT seq 3567 nt   +upstreamnt  +downstreamnt
atggttatcaaagggaaagacacggttcccaacaccgaagacttcaaggagcttcgcaat
ctcgtcacgcaccacatagagtctttcgattacatgacagagaaaggtctcgatgttatg
ttcactcgaatcaacgccgtcaatgtttacgacccatccaccgagaacaagtggaaaatt
agcttagaaaatccgaaagtgttctctcctcagaaggagagtttgagttcaaattcaagg
aaagagtctttgtatccctttgagtgtcggcaggcgaaggtatcgtacatgggagcgctt
atggctgatgtttgctttcagtatgacaatggactcggaagcggccttggagccgtcgtc
agagagaagtttgagtttggtgaattacctattatgctgatgtcaaaccgttgccactta
cagggtgctgattgccgaaagcttctaaagtgtaaagagtcaacttctgaaatgggaggg
tactttattttgaatgggattgagagagtgttccgatgtgttattgcaccaaagcggaac
catccgacgggtatgatccggaactcattcactggaaaacgggaaggatacagtgacaaa
gcagttgccattaggtgtgttagagacgaccagtccgctgtcactattaaggtgtactat
aatcgcaatggaagtgccagagttggattctggataggtggaagggaatttttgcttcct
gtcggccttgttctcaaggctctcactgaaaccaacgatgaggaaatatacgaaagcctg
aaccgttgttacaatgagcattacggaagaggcgatggatctattggaacccaactcgta
cgtgagcgagccaaaatcattcttgatgaagtgagagacttgggtctttttacccgggaa
cagtgccgcaagtatctaggagagcattttaaatctgatattgatgggctggaaaaagaa
agctatcctgttgttgctgaagccgtgctcaagaattatatttttgttcaccttgacaac
gatgacgacaagttcaatttgctcatcttcataattcaaaagctcttttctctggtggat
cagacttctttacctgataatccggattctctgcaaaatcaagaaattttagtcccgggt
caccttataacaatttacctcaaggaaaaacttgaagagtggctgcggaaatgcaaaagt
actattgaagaggagatgcgtaatgttaagagcaaatttgactttgaaaatcatgctgat
atcaagaagcttatgaacagaaatcaacccaggagtattggcacatcaattgagtctttg
ttgaaatcaggatgtatgactacaaggtctagtttggatttacagcagaaagtaggttac
actgttcaggcagagaggttgaactttctccgtttcctttcatttttccgggcggttcat
cgaggtgcttcctttgctggacttcggacaacaactgtgaggaagctgcttcctgaatct
tggggttttctttgccctgttcacactcctgatggggagccctgtggattactgaatcat
atgacacgtacttgccgaatctcttctcaattcgattccaatggaaacatcagagacttt
cggaagataagaaggtcggtcgttgatgttcttgttgggattgggatggtaacttcattg
ccaaaacttgtacgagctggaccaccaaaagtgattcatgttcttttagatggccaagtt
gttggatctctatcttctaacttagtccctgaggttgtcgcttatttgcggagactgaaa
gtggaggctccttcaatcattcctgaagacctcgaagtcggatatgtaccaacaagcatg
ggtggatcttatcctggattgtatttggcatcatgtcccgcaagattcatcaggcctgtt
aaaaacacatcgattccatccaacaatcttgaactgattggaccatttgagcaggttttc
atggaaataagctgtcctgatggtggaaatggaggaaggaataactcatcccttgcaact
catgaggaaattgatccaactgggatgataagtgtggttgctaatcttacaccttggtct
gatcataaccaaagtccccgtaacatgtatcagtgtcagatggcgaaacaaaccatggct
tactctactcaagcactccaattccgtgctgaccagaagatttaccacttgcagactcct
caatcccctgtggtgcgcacgaaaacgtacactgcatacaacattgatgagaatccaaca
gggactaatgcaatagttgctgtcctggctcatactggatttgatatggaagatgctatg
attttgaacaaatcatctgtggagcgggggatgtgtcatgggcaaatataccagacagaa
gctattgatttgtcagatcagaaaagccgatcgggtagtggtaataaaaggtttaggagg
aataatgctgtcaaatccgctcatccttgtgttgatgctgatggattaccatatgttgga
cagaaaatatatccaaacgagacgtattgtagtatctatgatggggtaaccaacgatttt
aagcccatgaagcgaaaaggaacagaccctgtcatcgttgactttgtttctcttgacatg
aagagcaagaaccatcctcagaaggcaaacattcgatttaggcatgccaggaatcccata
atcggtgacaaattcagtagtagacacggtcaaaagggtgtttgctcgcagctttggcct
gatattgatatgccgttcaatggagtgactggaatgcgtccggatctcatcattaaccct
catgctttcccatcaagaatgacaattgctatgcttttggaatctattgctgctaaggga
ggtagtctgcgtggggagtttgtagatgcaacaccgttccgtgatgcagtaaagaaaaca
aacggagaagaagagagcaaatccagtttacttgttgatgatcttggttccatgttgaag
caaaagggattcaatcactatgggacagagacattatacagtggttatttaggagtagag
ctcaagtgtgagatatttatggggcctgtttactaccaaaggctgcgtcacatggtctca
gacaagttccaggttagatctacaggaatggttgatcagctaactcgtcagccaatcaaa
ggaaggagacgaggtggagggattcgatttggtgaaatggaaagagactcattacttgct
catggagcttcctatctattacacgacaggctccacacctcttcagatcatcacattgcg
gatgtgtgttccctgtgtggaagcttgctgacttcttcggttttgaacgttcaacagaag
aagctgattcgagagattggaaatttaccacctggtaggactccaaagaaggttacttgc
gcttcttgcaagacaagcaaagggatggagactgtcgcaatgccgtacgtgttcaggtac
ttggctgcagaattggcgtcaatgaatattaagatgactcttcagttaagcaacagtggt
gaaggaagcgacagtgaaggagtctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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