KEGG   Brassica oleracea (wild cabbage): 106306352
Entry
106306352         CDS       T04124                                 
Name
(RefSeq) DNA polymerase alpha catalytic subunit isoform X1
  KO
K02320  DNA polymerase alpha subunit A [EC:2.7.7.7]
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03030  DNA replication
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    106306352
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:boe03032]
    106306352
Enzymes [BR:boe01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     106306352
DNA replication proteins [BR:boe03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase alpha / primase complex
    106306352
SSDB
Motif
Pfam: DNA_pol_B zf-DNA_Pol DNA_pol_B_exo1 DNA_pol_alpha_N DNA_pol_B_exo2 DNA_pol_B_2
Other DBs
NCBI-GeneID: 106306352
NCBI-ProteinID: XP_013598386
Position
C7:complement(23950409..23958847)
AA seq 1536 aa
MSGDNSTEAGRKRSRGAEAATRKEALERLKAIRQGGLRNLAASGGGYDIRIEEPIFDTVD
DDEYDAIVSRRREEARGFVVDDGEDGDLGYGDEGEEEDFTKPSGPDSTDESDDGGGFSGR
LRKKKAEKKKGKEQPQVKKVNPALKAAATITGEGRLSSMFTSSSFKKGKETDTVKCEGIL
DEVLAEVTPDDLDRERHRRRKQPPTVPVMFSRNKNVVSVTSSMAMKDSEPTSDRVFMEKE
LVKEMKEEVVTESEVTPPHDSEKMELPGSDGVVEDGSNNRRQSEAKAESEVKDVFTLNAT
VDLKEKDSALSATAGWKEAMVKGGTENGAPLSSNCEGQTEFDLDADGSLRFYILDAYEEA
FGASMGTIYLFGKVKMGDTYKSCSVVVKNIQRCVYAIPNDSVFPSHELITLEQEVKDSKL
SPESFRGKLHEMASNLKNEISQQLLQLNVSSYSMALVKRNYAFERPDVPVGEQYVLKINY
PFKDPPLPEDLKGESFSAVLGSNTSALELFILKRKIMGPSWLKISNFSTNSPSQRVSWCK
FEVTVESPKVITVLVSEEKVAHPPAVVTAINLKTIVNEKQNISEIVSASVLCFHNAKIDV
PMPGPERKRSGILSHFTVVRNPEGTGYPIGWKKEVADRNSKNRCSVLSFENSERALLNRL
FLELNKLDSDVLVGHNISGFDLDVLLQRAQACKVLSSMWSKIGRLKRSSMPKLKGNTNYG
SGATLGIMSCIAGRLLCDTDLCSRDLLKQVSYSLTDLSKTQLNRDRKEISPNDIPKMFQS
SKTLVELIECGETDAWLSMELMFHLSVLPLTLQLTNISGNLWGKTLQGARAQRIEYYLLH
TFHSKKYILPDKNSQRMKEIKSSKRRMNHGPEGHNVDELDADLALENDPSKDNKAKKGPA
YAGGLVLEPKKGLYDKYVLLLDFNSLYPSIIQEYNICFTTIPRSEDGVPRLPSSQTPGIL
PKLMEHLVSIRKSVKLKMAKETGLKYWELDIRQQAIKLTANSMYGCLGFSNSRFYAKPLA
ELITLQGREILQRTVDLVQNHLNLEVIYGDTDSIMIHSGLDDIEEVKAIKTKVIQEVNKK
YRCLKIDCDGIYKRMLLLRKKKYAAVKLQFKDGKTCEDIERKGVDMVRRDWSLLSKEIGD
LCLSKILCGGSCEDVVEAIHSELMKIKEEMRNGKVALEKYVITKALTKSPEAYPDSKSQP
HVQVALRMRQRGYKEGFNAKDTVPYIICYEQGNTSSASSAGIGERARHPDEVKSEDSRWL
VDIDYYLAQQIHPVVSRLCAEIQGTSPERLAECLGLDPSKYRSRSNDATGSDPSTALLFA
TSDEERYKSCEPLALACPNCSAAFNCPSITSSVYASISKKSETEESDSTFWLKLQCPKCE
PEGSTGRISPAMISNQVKRQIDGFVSMYYKGIMMCDDESCKHTTRIPNFRLLGDRERGTV
CPNYPNCNGTLLRKLLTPSLALLQYTEADLYKQLSYFCHILDTQCNLEKQMDVGVRIQVE
KALTKTRPAVQAAASMARSIRDRCAYGWLQLTDIAI
NT seq 4611 nt   +upstreamnt  +downstreamnt
atgtccggcgataactcgacggaggctggccgaaaacgaagccgaggcgcggaggcagcg
actaggaaggaagctctagagcggctgaaagcgattcggcaaggaggacttcggaatcta
gcagcttcaggtggcggctacgatatcaggatagaagaaccgatcttcgacaccgtcgat
gacgacgagtacgacgcgatcgtgtcccggcggcgcgaggaggctcgcggattcgtagtc
gacgacggggaagacggagatctgggttacggcgacgaaggcgaggaggaggatttcacg
aagcccagtgggcctgactcgactgatgaatcggacgacggcggtggatttagcgggaga
ctgaggaagaagaaagctgagaagaagaaagggaaggaacagcctcaggttaagaaggtg
aatccggcgctcaaggctgcggctactattacaggtgaagggagactctcttcgatgttc
acatcttcgagtttcaagaaggggaaggagactgatacggtaaagtgcgagggtattctt
gacgaggttttagctgaggtaactcctgatgatttggatagagaaaggcataggagaagg
aaacaaccacctacagttccagttatgttctctaggaataaaaatgtggtttctgttacc
tccagcatggcaatgaaggattcagaacccacaagtgatcgtgttttcatggagaaggag
ttggtgaaagagatgaaagaagaagttgtgacagaatctgaagtcacccctccgcatgat
tccgagaagatggagttacctggaagtgatggtgttgtagaggatggatcaaacaataga
agacaaagtgaagcgaaggctgagtcagaagtgaaggatgtgtttacattgaatgcaacg
gttgatttgaaagagaaggattcggctttaagcgccactgctggttggaaggaagcaatg
gtcaaaggtgggactgagaatggggctccacttagttctaattgcgaagggcaaacggaa
tttgatttggatgctgatggttcacttcgtttttacattcttgacgcttacgaggaggct
tttggagcgagtatgggcacaatatatttgtttgggaaggttaagatgggagatacgtac
aagagttgctctgtggtagttaagaatatccagagatgtgtttatgctattcccaatgat
tccgtatttccttcacatgaactaatcacgctcgagcaagaggtgaaagactctaaactt
tctcctgaatcattccgggggaagttacatgaaatggcatcaaatttgaagaacgaaatt
tctcagcaattgttacaactcaatgtttccagttatagcatggcacttgtcaagagaaac
tatgcatttgagaggcctgatgtgcctgttggcgaacaatatgtcttgaagataaattat
ccatttaaggatcctcctcttccagaagacctcaaaggggagtcttttagcgctgtcctt
ggctctaacaccagtgctttggagctttttatccttaaaaggaagattatgggaccgtct
tggctcaaaatttcaaacttttctaccaattcaccctctcaacgagtgagctggtgcaag
tttgaggttactgttgaatctcccaaggttatcactgttttagtttcggaggaaaaagtt
gctcatcctcctgctgtagttacagccataaatttaaagactatagtcaatgaaaagcag
aacataagcgaaattgtttctgcgtctgttctctgctttcacaacgccaagattgatgtt
ccaatgccaggtccagaaaggaagaggtctggtattctgagtcatttcactgttgttagg
aatcctgaaggaaccggttacccaattggttggaaaaaagaagtggctgacagaaattca
aagaaccgctgcagcgttttaagttttgaaaatagtgaaagagcattgctgaatcggctg
tttctggagctgaacaaattggacagtgatgttcttgtgggacataatatatcaggtttt
gatctggatgtccttctccaaagagcccaggcttgcaaagttttgagtagcatgtggtcc
aaaattggccgtctcaaacgctcttccatgcctaagcttaaagggaacactaattatggg
tccggagctacactagggatcatgtcttgcattgctggaagactcttgtgtgatacagat
ctatgttctcgtgacttgttgaagcaggtcagttattcgttaacagatctctcaaagaca
cagctaaaccgggacaggaaagagatatcgcctaatgacattcccaaaatgtttcagtca
tctaaaacacttgtcgaacttattgaatgtggtgaaacagatgcgtggttatcgatggag
ctcatgtttcatctaagtgttcttccactcactctccagctaactaacataagtggcaat
ctttggggaaaaactcttcagggagccagggcgcagagaattgaatattacttgctacat
acattccactcgaaaaagtacatcctcccagacaaaaattcacaacgtatgaaggaaata
aagtcatcaaaaagaagaatgaatcatggtccggagggccacaatgtagatgaattggat
gctgacctggctttggaaaatgatccgtctaaggacaacaaagcaaagaagggtccagcc
tacgctggtggactggtcttggagccaaagaaaggcttatatgacaaatatgtattgctt
ctcgatttcaatagtctttacccgtctattatacaggaatataatatctgtttcacgacc
ataccacgatcagaagatggagttcctcgtttaccgtcgagtcagacacctggaattctt
ccaaagttgatggaacatttggtcagtataaggaaaagcgtcaaactaaagatggcaaag
gaaacaggtcttaagtactgggagcttgacattaggcagcaggcaataaagctcacagcc
aatagtatgtatggatgtctgggtttttccaattcaagattctacgctaagcctttagca
gagctcataacactacagggaagggagatcctgcaaagaaccgtggatcttgtccaaaat
catttaaacctagaggtgatttacggtgacacagattcaatcatgattcacagtggacta
gatgatatcgaagaggtgaaagccattaaaacaaaagtcatccaagaggtcaataagaag
tatagatgtctgaaaattgactgtgatggtatatataagaggatgcttcttcttagaaaa
aagaaatatgctgccgtcaagttgcagttcaaggacgggaagacttgcgaggacattgaa
agaaaaggtgtggacatggttcgtcgagattggagcttactttccaaggaaattggagat
ttatgcttgtctaagatcttgtgtggagggtcatgtgaggatgttgttgaagcaattcat
agcgagcttatgaagataaaagaggaaatgagaaatgggaaagttgcacttgagaagtat
gtcatcaccaaggcattaactaagtcaccagaagcgtatccagattccaaaagccaacca
cacgttcaagttgcactcagaatgaggcaacgtggttataaagaaggtttcaatgctaag
gatactgtaccatatataatctgctatgaacagggtaatactagctctgcgagctcagca
gggattggcgaacgtgctaggcatcctgatgaggtgaaatcagaagacagcagatggttg
gttgacatagattactacttggcacagcagattcatcctgtggtgtctcgtttatgcgca
gagattcagggcacaagtcctgagaggttagccgagtgtttaggacttgacccatcaaag
tatcgaagcagatcaaacgatgctactggcagtgatccttctacagcactcttgtttgct
acaagcgatgaagaaagatacaaaagctgcgagccgttagcattagcatgccccaactgc
tctgctgctttcaactgtccatctattactagctcagtctatgcgtcgatcagtaagaaa
tctgaaacagaggaatctgattctacattctggcttaagctgcaatgcccgaaatgtgag
ccagaaggtagcacgggaagaatatcccctgcaatgatatctaaccaggtgaaaaggcag
atcgatgggtttgtatctatgtactacaaaggcataatgatgtgtgacgatgagtcttgc
aagcacacaactcgcatccccaacttccgtctgcttggtgaccgtgaacggggaacagtt
tgtccaaactatcctaattgtaatggaactctcttaagaaagcttttaactccaagcctt
gccttattacagtacactgaagcagacttgtacaagcagctgtcatacttttgccacata
ttagacacccagtgcaatctagaaaagcagatggatgttggtgtcagaattcaagtagag
aaagcattgacgaagacaagacctgcggttcaggcagcagcatccatggctcgaagtatc
cgagaccggtgtgcgtacggatggctgcaactcacagacatagccatttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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