KEGG   Brassica oleracea (wild cabbage): 106310756
Entry
106310756         CDS       T04124                                 
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 20-like
  KO
K11855  ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12]
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:boe01002]
    106310756
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:boe04121]
    106310756
Enzymes [BR:boe01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     106310756
Peptidases and inhibitors [BR:boe01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   106310756
Ubiquitin system [BR:boe04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    106310756
SSDB
Motif
Pfam: UCH UCH_1
Other DBs
NCBI-GeneID: 106310756
NCBI-ProteinID: XP_013603427
UniProt: A0A0D3DMK7
Position
C8:16181233..16184083
AA seq 642 aa
MLVANSEFSSSILPRSPLIPNPVETLEESIGNNQVSFSTEEVSVPPRNSDEPLSTPLDET
LIAPSPLRLEHGECSDAQVMNKPINHSKSNDTNLDISLSKSPDNRQQWSPNVSPGSDTDV
DLGNQPLWRFRQEPPKIVESTCVGAGLLNLGNSCFINSVLQCFTHTVPLIESLYSYQYEE
PCNCNQRFCVIRALRYHIGVALETTSVFSISPLYFFNNLRYFSPDFRRYQQEDAHEFLHA
FLNKLEICCLNRRNDVNFVQHIFGGRLVSELRCCNCDYVSETFEDSLGLSLEIEDVDNLQ
SALDSFTRVEKLEEQMKCDNCDEKVSKEKRLLLHNLPQVITFHLKRFKNNGLFMVKNYNY
VEFPLELDLQPYMSNDQVAAKYYLYALVKHFGSLAYGHYSSVVRSAPSIWHKFNDKQVTR
VDEDCVLSQNSYILFYAREGTPWFSTAIEELHPMTEEDTSSEYPSPKSVSDPSNEECSSE
ISSENVSKKGCGSAGVSDLLHVETEESFVSHSDEPKEDDELSQSEESSDEESSMEVLLDQ
HDPDDDSNNSCTEKEADSCFAIERATTGVAFSPYLIGSSPKKPEGNFQIQLERVEAKKNH
EEEEPYKQPLLISLMKKPPPRDRELAEAMSTSGSAQKKLKTS
NT seq 1929 nt   +upstreamnt  +downstreamnt
atgctggtggctaattccgagttctcttcatctattttacctcgttcgccgttaatacca
aacccagtcgaaaccctagaagagtcgattggtaataatcaggtctcgttctcgacggag
gaggtctcagttccgcctcgaaactcggatgagcctctctctactccgttggacgaaacc
ctaatcgcgccttctccgttacgtcttgagcacggcgagtgcagtgatgctcaagtcatg
aacaagcctataaatcactctaagagcaacgatacaaacttggacattagtttgtctaaa
tctccagataatcgccaacaatggtctcccaatgtttcacctggatccgatactgatgtt
gacttagggaaccaacccttgtggagattcagacaagaacctccaaagatcgtggaatcc
acttgtgttggtgctggacttttgaacctaggcaacagctgtttcattaactcggtcttg
caatgtttcactcacaccgtgcctcttatcgagagcctctactcataccaatatgaagag
ccttgtaactgcaaccagaggttctgtgtgataagggctcttcgatatcacatcggtgtt
gcactcgagacgacttcagtattttcaatatctccgttgtatttctttaacaatctccgt
tatttttcacctgacttccggcgttaccaacaagaagacgcacatgagtttctacatgcg
tttttgaataagttggagatatgttgtttgaatcgaagaaatgatgttaactttgttcaa
catatctttggtggtcgtctcgtcagtgagcttcgttgctgcaactgcgactatgtttcc
gagacatttgaagattctcttgggttgagtttggaaattgaagatgttgacaaccttcaa
agtgcactagattcatttactcgcgtggaaaaacttgaagagcaaatgaagtgtgataac
tgtgatgaaaaagtttcaaaggagaagcgactcttgctacataatctgccacaggttatc
acattccacttgaagagattcaagaataatggattattcatggtgaagaactataactat
gtcgagtttccgttagagttagacttgcaaccatatatgagcaatgaccaagttgctgca
aaatattatctttatgctcttgtgaagcattttgggtcattagcttatggtcattactct
tccgttgtgaggtcagccccaagtatatggcataagtttaatgacaaacaggtcactaga
gtcgatgaagattgtgtgttatcacaaaattcatatattcttttctatgcaagagaaggg
actccatggttttcaacagccattgaagagttacatccaatgaccgaagaagatactagc
tcggaatatccttcgccaaagtctgtctctgatcctagcaacgaggagtgttcatctgaa
atcagttctgagaatgtatccaaaaagggatgtggctcagcgggagtatctgacctatta
catgtcgagacagaagagagttttgtttcccactccgacgagcctaaggaagatgatgag
ttgtctcaatctgaagagtctagtgatgaggaatcttccatggaagtgcttttggaccag
catgatcctgatgatgattccaacaactcatgcactgagaaagaagcagattcttgtttt
gccattgaaagagctacaactggtgttgccttttctccttatttgataggctcgtcacca
aaaaagccggaaggaaattttcaaattcaactcgaacgagtggaagctaaaaagaaccat
gaagaagaagaaccttacaagcaaccattactaataagtctcatgaagaaacctccacca
cgtgatagagagttggccgaagctatgtctacatctggttctgcacaaaaaaaactaaaa
acatcatga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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