KEGG   Brassica oleracea (wild cabbage): 106312392
Entry
106312392         CDS       T04124                                 
Name
(RefSeq) paired amphipathic helix protein Sin3-like 5 isoform X1
  KO
K11644  paired amphipathic helix protein Sin3a
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:boe03036]
    106312392
Chromosome and associated proteins [BR:boe03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     106312392
    REST complex
     106312392
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    106312392
SSDB
Motif
Pfam: Sin3a_C Sin3_corepress PAH YIF1
Other DBs
NCBI-GeneID: 106312392
NCBI-ProteinID: XP_013605359
UniProt: A0A0D3AA75
Position
C1:26844458..26850466
AA seq 1115 aa
MKRVREEVYVEAQTRGQTNGRALTIGGGGGNMGGLTTNDALSYLKAVKDMFQDKKDKYDT
FLALMKDFKAQRVNTDGVIASVKELFKGYDDLLLGFNTFLPKGYRITLPEKKPVAFGEAI
DFVNKIKARFGDDNRAYKRFLDILNMYRKEGKSISSVYQEVTLLFQGHEDLLAEFVNFLP
NNSGSGSGSSAVPHDRSSSLHPMHFNKKIKIGSRLDEYTAHSDQREDGDENLVAAGNSRG
KSLNQGQWPPGEDNEDVVFGQKNNMVKGINELDLTDCVQCTPSYRHLPDDYPIPISSYRN
SLGEKVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNAAIKRVE
TLLEKINNNTISTPICIKEHLSVLNLRCIERLYGDYGLDVMEILKKNSHIALPVILTRLK
QKQEEWARCRFDFRKVWADVYAKNHHKSLDHRSFYFKQQDSKNLSTKGLVAEIKDISDGK
HKEDPLHAISVGTKPSFTPDLEFSYSDTQVHADLYQLIKYYCEEICATEQSDKVMKLWVA
FLEPMFGVPSRSQTSEAMIDVAKSKDNQEQHDACEAVKDSTCNVSLVSNLKLITPPTTPN
KENPTVQGSSVAQETIQQDKLHVGAAMNIKDTQPVAPPRKDLLMEGVENRTDVIMGDQKV
EREEGELSPTESFEQDNYEVYRDNGVECLQKLPDNVGNNKEQEHKGGAVCTEAKAKSNTL
PKDDENKITHASGSKCGGQVSSDEEHKGAMNCDRLCSVIESENEAVGMINANESEDGSLT
FSERYLQPVKPLAKHVPGALQVSESNSPNDSRVFYGNDSFYVLFRLHQMLYERIQSAKIH
SERKWKAPDPDNTSPDSYTRFMDALYNLLDGSSDNTKFEDECRALIGAQSYVLFTLDKLV
QKFVKHLHSVAADDTDTKLLQLYTYENYRKPGRFFDIVYHENARALLHEQNIYRIEYSSA
QTRLAIQLMNNGNDHQPEVTAVTVEPGFANYLQNDFLSLVPDEERPGLFLKRNMAKMSGP
DESSGMLRAMEGLKIINEVECKMACSSSKVKYEPNTSDLLYRSKQRKPKVNPDGLDNDKN
PGSSETSRKRRISRFHMCLNRRLAALPLQRGFKHV
NT seq 3348 nt   +upstreamnt  +downstreamnt
atgaagagagttagagaagaggtttacgttgaagctcagacacgaggacaaacaaatggt
agggctttaacgataggtggaggaggaggaaacatgggagggctaacaacgaatgatgcc
ctgagctatctcaaagctgtcaaggatatgtttcaagacaagaaagacaagtacgacact
ttccttgcactcatgaaggactttaaagcccagagagttaacactgatggcgtcattgca
agcgtaaaagagttgttcaagggctatgacgacttgcttttgggttttaataccttcttg
cctaagggttacagaataacccttcctgagaagaagcctgtggcttttggagaagctatc
gattttgttaacaagatcaaggcgcggtttggggatgataaccgtgcgtataaaagattc
ctggacatcttgaacatgtatagaaaggaaggcaagtccatctcctctgtctatcaagag
gttactctgttgttccagggccatgaagatctgcttgctgagtttgttaatttcttacct
aataattcaggatcaggttcgggaagcagtgcagtaccgcatgatagaagttcttcactt
catccaatgcattttaacaagaaaataaaaattggaagtaggcttgatgagtataccgct
cactctgatcaacgagaagatggtgatgagaatcttgtggctgctggtaattctcgggga
aaatcccttaatcaaggtcaatggccgccgggagaagacaacgaggatgtagtctttggc
cagaaaaataatatggtcaagggtataaatgaactggatcttactgactgtgtacaatgt
acaccaagctatcgtcacctgccagatgattatcccattcctatttcaagctacagaaat
tcactaggtgaaaaggtactcaatgatcattgggtttctgtcacatcggggagtgaggat
tactcattcaaacacatgcgtaaaaaccagtatgaagaaagcttgtttcggtgtgaagat
gacaggtttgagttggatatgttattagagtctgtgaatgcagcaattaagcgtgtggaa
actcttctggagaagatcaacaacaacacaatctctacaccaatttgtatcaaagaacac
ttatcagtgctgaacctaagatgcattgagcggttgtacggggattatgggcttgacgtt
atggaaattctgaagaagaattctcatatcgccttgccagtgatactaactcgcttgaag
cagaaacaagaagaatgggctaggtgtcgctttgatttcaggaaagtatgggctgatgta
tatgctaagaatcatcacaaatcactagatcaccgtagcttttattttaagcagcaggac
tccaagaatctgagcacaaaaggtttagtggcagaaataaaagatatcagtgatggaaag
cataaagaagacccgcttcatgccatttctgtcggaactaagccctctttcaccccagac
ttggagttcagttattccgatactcaagttcatgctgacttataccaactaatcaagtat
tactgcgaagaaatatgtgctactgaacagtcagataaagtaatgaagctgtgggtagcc
tttttagagcccatgtttggcgttccttctaggtctcaaactagtgaggcaatgatcgat
gtggccaagtctaaagacaaccaagagcagcatgatgcatgtgaggcagtgaaggacagc
acctgtaacgtttctcttgtctcaaacctaaaacttataacacctccaacaacacctaac
aaagaaaacccaacagtacaagggagctctgtcgcacaagaaaccattcagcaagataaa
ctgcatgttggcgcagctatgaatattaaggatacccagccggtggcaccacccagaaag
gatttgttaatggagggtgtagagaatcgtactgatgtaataatgggagatcagaaggtc
gagcgagaagagggtgagttatcccccaccgaaagttttgagcaagacaattatgaggtt
tatagagacaatggcgttgagtgtcttcagaaactgccagacaatgtaggaaataataaa
gagcaagagcacaaaggaggtgcagtctgtactgaagccaaagcaaagagcaatactctc
cctaaagatgatgaaaataaaatcactcacgcctcaggaagcaaatgtggtggccaagtt
tcttccgatgaagagcataaaggagctatgaactgtgaccggctttgcagtgtgattgag
agtgaaaacgaggctgtagggatgattaatgccaatgagagtgaagatggatctctcaca
ttttcagaacggtatctgcaacctgtaaagccccttgcaaagcatgtgcctggagcacta
caagtcagtgaaagtaactctccgaatgattctcgagttttctatgggaatgattccttt
tatgtgctttttaggctgcatcaaatgttgtacgagagaatacaatctgcaaagatacat
tcagagaggaaatggaaagctccagatccagataacacatctcctgattcttataccagg
ttcatggatgctctctacaatttacttgacggctcgagtgataatacaaagtttgaagat
gaatgccgagctcttattggagcacaatcatatgttctcttcacattggacaagctagtt
cagaagtttgtcaagcatcttcattcagttgcagctgatgatacagacaccaagctactg
caactatacacatatgagaactacagaaaaccgggaaggttctttgatatagtgtaccat
gagaatgcgcgagcccttctccatgagcagaacatataccggattgaatattcatctgca
caaacccgtctcgcgattcaacttatgaacaacgggaacgatcatcagcctgaagttaca
gctgtaacggtggaaccaggttttgcaaattatctacagaatgactttctttcgcttgta
cctgatgaagaaagacctggtctatttctgaagaggaacatggcgaaaatgagcggtcca
gatgaatcttcagggatgttgcgtgcaatggaaggactgaagattatcaatgaggtcgag
tgcaagatggcttgcagttcttccaaggtcaagtatgaaccaaacacatcagatcttctg
tatagaagcaagcagaggaaaccaaaagtgaatccagatgggcttgacaatgataaaaat
cctggtagcagtgaaacctcgagaaagcgaagaatatcgcgttttcacatgtgtctgaac
cgtagacttgctgccttgcctttacaacgcggcttcaagcacgtgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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