KEGG   Brassica oleracea (wild cabbage): 106313325
Entry
106313325         CDS       T04124                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta-like
  KO
K11583  serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    106313325
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:boe01009]
    106313325
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:boe03019]
    106313325
   03036 Chromosome and associated proteins [BR:boe03036]
    106313325
Protein phosphatases and associated proteins [BR:boe01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     106313325
Messenger RNA biogenesis [BR:boe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     106313325
Chromosome and associated proteins [BR:boe03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     106313325
SSDB
Motif
Pfam: EF-hand_13 EF-hand_7 EF-hand_6 EF-hand_1 EF-hand_8 EF-hand_5 P2R3B_EF-hand DUF4187
Other DBs
NCBI-GeneID: 106313325
NCBI-ProteinID: XP_013606566
Position
C9:2880314..2883650
AA seq 541 aa
MSMVDAIVPGADMSRVDADLLQLQEMSSFVLTSKPGFTQSLFDQWLSLPQAHQQIASLLH
DALAGSTLNVASGSSSAASNSIPSMFPAGSAAPPLSPRSCGSPRMTRQRAGLSNLGSSLK
PTTIEPAKEPMPQFYFENGRPPPSEMKEQCMFRINHFFYGHMDGLQIQEFKLVTREICKL
PSFFSTSLFRKIDVNNTGFVTREAFIDYWVNGNMLIMDTTTQIFKILKQQNQNYIVKDDF
KPLLKELLATHPGLEFLQTTPEFQERYAETVTYRIFYYINRSGNGRLTFRELRRGNLIDA
MIHADQEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLMRYGNHALTFRIVDR
IFSQVGRKFTSKVEGKMGYEDFVYFILAEEDKSSEPSLEYWFNCIDLDGNGIITRNEMQF
FYEEQLRRMECMAQEAVLFEDILCQMIDMIGPENESHVTLQDLKGSKLSGNVFNILFNLN
KFMAFETRDPFLIRQERENPTLTEWDRFAHREYVRLSMEEDVEDASNGSAEAWDESLESP
F
NT seq 1626 nt   +upstreamnt  +downstreamnt
atgagtatggttgatgcgattgttcccggagcagacatgtctcgcgttgacgccgatttg
cttcagctccaagagatgtcttccttcgtcctgacctcaaaacctggattcacacagagc
ctcttcgaccagtggctctcccttccccaagctcatcaacagattgcatcattgcttcat
gatgcgttggctggatctactttgaatgttgcatctggttcgagttctgccgccagcaat
tctataccatcaatgtttcctgcgggaagtgctgctcctccgctttcgccgaggagctgc
ggctcacctcgtatgacgaggcagagagctggcctttctaacttaggctcttcgctgaaa
ccaacaaccatagagcctgctaaagagcctatgcctcagttttattttgaaaatggtcgc
ccaccaccaagtgagatgaaagagcagtgtatgtttagaatcaaccatttcttctatggt
catatggatggattgcagatacaagagttcaagttagtcaccagagaaatctgcaagctc
ccatctttcttctccacttcacttttcaggaagatagatgtcaacaacactggttttgtt
actagagaagcatttattgattattgggtgaacgggaacatgctgataatggacacaact
acacaaatctttaagatactaaagcagcaaaatcagaattacattgttaaggatgatttc
aaaccactacttaaagaactattggctacacatcctgggttagagttcctgcaaaccaca
cctgagttccaagaaagatatgctgaaactgtcacctacagaatattttactacataaat
cgatctggaaatgggagacttacttttagggagcttagaagaggaaacttaattgatgca
atgattcatgctgatcaagaagaagacatcaacaaagtattgaggtacttctcatatgag
catttctatgtcatatactgcaagttctgggagctggatacggatcatgatttccttatt
gacaaagaaaaccttatgagatatggaaaccatgctcttactttccggattgttgacaga
atattctcccaggttggaaggaagtttactagcaaagttgaagggaaaatggggtatgag
gattttgtgtatttcatacttgcggaagaagataagtcgtcagagcctagccttgaatac
tggtttaactgcatagacttggatgggaatgggatcattacgcgaaatgagatgcagttc
ttttatgaggagcagttgcgtcgaatggagtgtatggcgcaagaggctgttctttttgag
gatatcttatgtcagatgattgatatgatcggaccagagaacgagagccatgtaacgctg
caagacctgaagggctccaagctctctggaaacgtattcaacatcctgtttaatcttaac
aagtttatggcgtttgaaacacgggatccattcctcattcgtcaggagcgtgagaaccca
acattgacagagtgggaccgttttgcacatagagagtacgtaaggctttcgatggaagaa
gatgttgaagatgcatccaatggaagtgctgaggcttgggatgagtccctggagtctccc
ttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (8)   
   Pfam (8)   
All databases (22)   

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