KEGG   Brassica oleracea (wild cabbage): 106317841
Entry
106317841         CDS       T04124                                 
Name
(RefSeq) cell differentiation protein RCD1 homolog
  KO
K12606  CCR4-NOT transcription complex subunit 9
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106317841
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:boe03019]
    106317841
Messenger RNA biogenesis [BR:boe03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     106317841
SSDB
Motif
Pfam: Rcd1
Other DBs
NCBI-GeneID: 106317841
NCBI-ProteinID: XP_013611076
UniProt: A0A0D3EFW8
Position
C9:49731078..49733341
AA seq 294 aa
MANLPPPFAFSKASSSSNDPKPSPVEQLVLDICDPELRENALHQLSKKREIFHELAPLLW
HSVGTTAALLQEIISVYPFLSPPTLTVAQSNRVCNALALCQCVAAHPETKMPFLRAQMPL
YLYAFLKTSSKERPFEYLRLTSLGVIGALVKVEDTEVIKFLLETEIIPLCLRTMESGSEL
SKTVATFIIQKILLDNEGLRYMCVCVDRFFALSRVLGNMVTSLAEAPSPRLLKHIVRCYL
RLTDNIRACLALRDYLPDLLSDTTFTSCLYEEPAAVQWLQQMHHNIRVRPPPGL
NT seq 885 nt   +upstreamnt  +downstreamnt
atggctaatcttcctcctcctttcgctttctccaaggcttcttcttccagcaacgatccc
aagccctctcccgtggagcagttggtgctcgacatctgtgaccctgaactcagggagaat
gctcttcaccagctgtccaagaaaagggagatctttcatgagttggctccgctgttgtgg
cactctgttggtactaccgctgctcttcttcaggagatcatctcagtttaccccttcctg
tctcctccaaccctgactgttgctcagtccaacagggtctgcaatgcccttgcgctttgt
cagtgtgttgctgctcatcctgaaacgaaaatgccgttccttagagctcagatgccattg
tacctgtatgctttcttgaagacgtcaagcaaggagagaccctttgagtacctgcgtttg
actagcttgggtgttattggtgcacttgtcaaggttgaggatacggaagtgatcaagttc
cttcttgaaactgaaatcatcccattgtgccttcgtacaatggaaagtggcagcgagtta
tcaaaaactgttgcaaccttcattattcagaaaattttgctggacaacgaagggcttcgt
tacatgtgcgtctgtgtggatagattctttgctctgagtcgagttttggggaatatggtg
acttcacttgcagaagcaccttctcctaggcttctaaagcacatcgtccgctgttacctt
cgcttgacagataacatcagggcctgccttgcactcagagactacctcccggatcttcta
agcgataccaccttcaccagctgtctctatgaagaaccagctgcagtgcagtggctgcag
caaatgcaccacaacatcagggttagaccaccaccagggctctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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