KEGG   Brassica oleracea (wild cabbage): 106319108
Entry
106319108         CDS       T04124                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 45 homolog
  KO
K12479  vacuolar protein sorting-associated protein 45
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:boe00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    106319108
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:boe04131]
    106319108
Membrane trafficking [BR:boe04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab associated proteins
    106319108
SSDB
Motif
Pfam: Sec1 YxiJ
Other DBs
NCBI-GeneID: 106319108
NCBI-ProteinID: XP_013612801
UniProt: A0A0D3AR52
Position
C2:24764942..24768343
AA seq 569 aa
MALVTSVRDYINRMLQDISGMKVLILDSETVSNVSIVYSQSELLQKEVFLVEMIDSISAS
NESMSHLKAVYFVRPTSENVQKLRHQLANPRFGEYHLFFSNLLKDTQIHILADSDEQEVV
QQVQEFYADFVAGDPYHFTLNMAANHLYMLPAVVDPSGLQRYSDRVVDGIAAVFLALKRR
PVIRYQRTSDTAKRIAQETAKLMYQQESGLFDFRRTESSPLLLVIDRRDDPVTPLLNQWT
YQAMVHELIGLQDNKVDLRAIGSLPKDQQVEVVLSSEQDAFFKSNMYENFGDIGMNIKRM
VDDFQQVAKSNQNIQTVEDMARFVDNYPEYKKMQGNVSKHVTLVTEMSKLVEARKLMLVS
QTEQDLACNGGQGAAYEAVTDLLNNESVSDIDRLRLVMLYALRYEKENPVQLMQLFNKLA
SRSPKYKQGLVQFLLKQAGVEKRTGDLFGNRDLLNIARNMARGLKGVENVYTQHQPLLFQ
TMESITRGRLRDVDYPFVGDHFQQGRPQEVVIFMVGGTTYEESRCVALQNSTNSGIRFIL
GGTAVLNSKRFLMDLEEAQRISRSGSHMV
NT seq 1710 nt   +upstreamnt  +downstreamnt
atggcgctggtaacatccgtgcgcgattacatcaaccggatgcttcaggatatctccggc
atgaaggttctcatactcgactccgaaacggttagcaatgtaagcatcgtgtattcgcaa
tcagagctgctccagaaagaagttttcctcgtggagatgatagattcgatctcggcgtcg
aatgaatcgatgtcgcatctgaaagctgtttatttcgtccgtccgacgtcggagaatgtt
cagaagctgcggcaccagcttgcgaatcctagatttggagaataccatttatttttctcc
aacctgttgaaggatactcagattcatattttggctgattctgatgagcaagaggttgta
caacaagttcaggagttttatgcagactttgttgctggtgatccgtatcatttcactttg
aatatggcagcaaatcacctatatatgctcccagcagttgtcgatccctctggtttgcaa
cgctactccgaccgggttgttgatggaattgcggctgtctttctggcgttgaaacgtaga
cctgtcatcagataccagaggacctctgatactgccaaaaggattgcacaggaaacagct
aaattgatgtatcagcaagaaagcggtctttttgacttcagacgcactgaaagctctccg
ttgctgcttgtaattgacagaagagatgacccagttaccccattactgaatcagtggaca
tatcaggcaatggtgcacgaactcataggacttcaagataataaagtagacttgagagcc
attggaagtcttccaaaagatcagcaagttgaggtggttttatcatcagaacaggatgca
ttcttcaaatcgaacatgtacgaaaattttggggatattggaatgaacatcaagcgaatg
gtagatgactttcagcaggtggctaagagtaaccaaaatatccagaccgtagaggacatg
gccagatttgttgacaactaccctgagtacaaaaagatgcaaggcaacgtctcaaagcat
gtgaccctggttactgaaatgagcaagcttgttgaagcaaggaaactgatgctggtttca
caaacagagcaggacttggcttgcaatggtggccaaggagctgcgtatgaggcagttacg
gatctcttaaacaatgaaagtgtgtctgacatcgaccggctacgtttggtgatgctgtat
gctctgcgctatgagaaagagaatcccgttcagttgatgcaactgttcaacaaattggct
tcacgctctcccaagtacaaacaagggcttgttcaatttctcttgaaacaagccggcgta
gagaagcgtactggtgatctgtttggaaacagagatcttttgaatatagcacgcaacatg
gctcgtggacttaagggggttgagaatgtgtacactcaacatcagccacttttgtttcaa
acaatggagagcataaccagagggagattgcgagatgtggattacccctttgttggagat
cattttcaacagggacggccacaagaggtggtgatattcatggttggtggaacaacgtac
gaggaatcacgctgcgttgctctacaaaactcgaccaactccgggattcggtttattctg
ggcggcaccgcagtgcttaattccaagaggtttctcatggacttggaagaagcacaaagg
atatcaagatcaggtagccatatggtgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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