KEGG   Brassica oleracea (wild cabbage): 106327014
Entry
106327014         CDS       T04124                                 
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
  KO
K18663  activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:boe03400]
    106327014
Enzymes [BR:boe01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     106327014
DNA repair and recombination proteins [BR:boe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    106327014
SSDB
Motif
Pfam: Sec63 DEAD ResIII Helicase_C AAA_22 AAA_30 T2SSE AAA_19 SWI2_SNF2 IstB_IS21 Helicase_PWI
Other DBs
NCBI-GeneID: 106327014
NCBI-ProteinID: XP_013620466
UniProt: A0A0D3AY51
Position
C2:50702965..50715527
AA seq 2082 aa
MLVQLPRLTSSLRDPFDIDQAYLRRKTILQTLNKPRSSGSRLDESDLARRIVHQWEGASP
EVRQAYKQFIGAVVELIDREVPSEEFREVAFTAYRLFGKPVEEEDGGFSDKSLAEKKLEL
QNVVGHAVSDANVKNVASFALALYSIQPAHQSEVYADEVDDGVEFGADLVFNLPSRFLVE
ESLGERGFQDEESNGAHASFSEGWSDVSDMTKNQNAGKFDLSWLRDACGQMVRESNSQLS
RDELAMAICRFLDSDKPGEEIAGDLLDLVGDGAFETVQDLIMHRKEIVDAIHHGQMVLKS
DKTASNTQTRMPTYGTQVTVQTESAKQIEKLRRKEEKKNKRSAELGLESEISEANFSYLL
EASEKNSGFDDLIGSGEANSLAFALPQGTVRKHLKGYEEVFIPPTPTAQLKPGEKLIEIK
ELDDFAQAAFHGYKTLNRIQSRIFQTVYNTNENILVCAPTGAGKTNIAMISVLHEIKQHF
RDGYLHKNEFKIVYVAPMKALAAEVTSAFSRRLGPLNMVVKELTGDMQLTKSELEETQMI
VTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGAVIEALVARTLRQVESTQTMI
RIVGLSATLPSYLQVAQFLRVNPDTGLFYFDSSYRPVPLAQQYIGITEHNFAAKNALLNE
ICYKKVADSIRQGHQAMIFVHSRKDTSKTAEKLIDLARENETLDLFTNETHPQFHIRKKD
VIKSRNKDLVKFFEAGFGIHHAGMLRSDRTLTERLFSDGLLKVLVCTATLAWGVNLPAHT
VVIKGTQLYDAKAGGWKDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYYLRLLTS
QLPIESQFISSLKDNLNAEVVLGTVTNVKEACAWLGYTYLSIRMKLNPLAYGIGWDEIIA
DPSLTLKQRALVAEAARSLDKAKMMRFDEKSGNFYCTELGRVASHFYIQYSSVETYNEML
KRHMNESEIIDMVAHSSEFENIVVREEEQHELETLARSCCPLEVKGGPSNKHGKISILIQ
LYISRGSIDAFSLVSDASYISASLARIMRALFETCLRKGWCEMTLFMLEYCKAVDRQLWP
HQHALRQFDRDIPFDTLRKLEERGADLDRLYEMEEKDIGALIRYNPGGRLVKQHLAYFPS
IQLEATVSPITRTVLKVDLLITPDFIWKDRFHGAALRWWILIEDTENDYIYHSDLFTLTK
RMARGEPQKLSFTVPIFEPHPPQYYVHAISDSWLHAESFYTISFHNLALPEARTSHTELL
DLKPLPVTSLGNRLYESLYKFSHFNPIQTQIFHVLYHTDNNVLVGAPTGSGKTISAELAM
LRLFSTQPDMKVVYIAPLKAIVRERMKDWKKHLVAPLGKEMVEMTGDYTPDLVALLSADI
IISTPEKWDGISRNWHTRSYVKKVGLVILDEIHLLGADRGPILEVIVSRMRYISSQTERS
VRFVGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPIEVHIQGYPGKYYCPRMNSMNK
PAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDEHPRQFLSVSEEDLQMVLSQI
TDQNLRHTLQFGIGLHHAGLNDQDRSVVEELFVNNKIQVLVSTSTLAWGVNLPAHLVIIK
GTEYFDGKTKRYVDFPLTEILQMMGRAGRPQFDQHGKAVILVHEPKKSFYKKFLYEPFPV
ESSLKEKLHDHFNAEIVSGTIGNKEDAVHYLTWTYLFRRLMANPAYYGLEGTQDESVCSY
LSRLVQNTFDDLEDSGCLKVTEDSVEPMMLGTIASQYYLSYTTVSMFGSNIGPDTSLEAF
LHILAGASEYDELPVRHNEENYNKTLSEKVRYRVDNNHLDDPHTKANLLFQAHFSQLALP
ISDYNTDLKSVLDQSIRILQAMIDICANSGWLTSSLTCMRLLQMVMQGMWSDQDSSLWMI
PCMNDDLLGSLTARGIHTLHQLLELPRETLKSITGNFPASKLSQDLQRFPRIQMNVRLQR
KDPDGPSTLEIRLEKISKRNTSRALAPRFPKVKDEAWWLVLGDTSTSELFAVKRVSFTGR
LITRMELPPNITSLQDTKLILVSDCYLGFEQERSIEQRPARR
NT seq 6249 nt   +upstreamnt  +downstreamnt
atgttggttcagcttcctcgcttgacaagctctctgagagaccccttcgacatcgatcaa
gcctaccttcgccgcaaaaccatactccaaactctcaacaagcctcgcagctctgggagt
cgccttgatgaatctgaccttgctaggaggatagtccatcaatgggaaggagcttctcca
gaagtgcggcaagcatacaagcagtttattggagctgtggtggagttgatagatcgggaa
gttccatcagaggagtttcgtgaggttgcttttacagcgtatcgtctctttgggaagcca
gtagaggaggaggacggtggttttagtgataagagccttgctgaaaagaagttagagttg
caaaatgttgttgggcatgctgtctcagatgctaatgtaaagaacgtggcctcctttgct
ctggcactctactcgatacagcctgctcatcagtctgaggtatatgcggatgaggttgat
gatggagttgaatttggtgctgaccttgttttcaatctaccaagtcgttttctggtggaa
gaatctcttggagaaagagggtttcaggatgaggaaagcaatggcgctcatgcatcattt
tcggaaggatggagtgatgtcagtgacatgacaaagaatcaaaatgcaggaaaatttgat
ttaagttggcttagagatgcatgcggacagatggttagagagagcaattcacaactttca
cgtgatgaactggctatggctatatgtaggtttctggattcggataagcctggtgaagag
atagctggggatttgttggatcttgttggggatggcgcatttgagactgttcaagacctt
attatgcatcggaaggagattgttgatgctatccatcatggtcagatggttctcaagtct
gacaaaacagcttcaaacacccaaacccggatgcctacatatggcacacaggttactgtt
caaacagagtccgcaaagcaaattgagaaacttcggcgtaaggaggaaaagaaaaacaaa
cgcagtgccgagcttggtttagagagtgaaatatcggaggccaatttttcttatttacta
gaggcaagtgaaaagaatagtgggtttgatgatctgatcgggtctggagaagccaattct
cttgcatttgctcttccccaagggactgtaaggaagcacttaaaaggatatgaggaagtc
tttatcccgccaacccctaccgcacaattgaaaccaggcgagaaactgattgagataaag
gaattggatgacttcgctcaagctgcttttcatgggtacaaaactttgaaccgtattcag
tctcgaatatttcagacagtttacaacaccaatgagaatatattggtgtgtgctccaaca
ggagctggaaaaacaaatattgctatgatctctgttttacatgagattaaacaacacttc
agggatggctacttgcacaaaaacgagtttaagattgtttatgtagctcctatgaaggcg
ttagcggcagaggtcacatcagcttttagccgtcgtctcggtccattaaatatggttgtg
aaggagcttacaggggatatgcaactcaccaagagcgaacttgaggaaactcagatgata
gtgacaacaccagaaaaatgggatgtcattactcgcaaaagcagcgacatgtcattgtca
atgctagtaaaactcttgatcatcgacgaagtgcatcttctgaatgatgatagaggtgca
gtgatagaggcattagttgctcgaaccctccgtcaggtggagtcaacgcagacaatgata
agaattgtaggcctgtcagccactttacctagttacctacaggttgctcagtttctacga
gtgaacccagacactggccttttctattttgattcgagctatcgcccagttcccttagct
cagcagtatataggcatcaccgagcataactttgctgcgaaaaacgcattgctaaatgag
atatgctacaaaaaggttgctgattcaattagacaaggtcatcaagcaatgatttttgtt
cattcccgaaaagacacttcaaaaacagctgagaaattgattgatcttgctcgggaaaat
gaaactctggatttgttcacgaatgagactcatcctcagtttcacataagaaagaaagat
gtcatcaagtccagaaataaggatcttgtcaaattctttgaagctggcttcggtattcat
catgctgggatgttacgatctgatagaacacttacggagaggctgttttctgatggactc
ttgaaggtgcttgtttgcactgcaactcttgcctggggtgtaaatctgcctgcacacaca
gtcgtaattaagggaacacaattgtacgatgccaaggctggtgggtggaaagacttggga
atgcttgatgtcatgcagatctttggaagagctgggagaccgcagtttgacaagagtggt
gagggaattattatcacatcccatgacaagcttgcttactatcttcggctgctgacgagt
cagcttcccatagaaagtcagttcataagctccttgaaagacaatttaaacgcagaagtg
gtattgggaactgtgactaatgttaaggaagcttgtgcgtggcttggatatacatatttg
tcaattcggatgaagttaaatcctttggcctatggcattggatgggacgagataattgcc
gatccttctttaacattgaagcaacgtgcccttgtggctgaggctgcacgttcactagac
aaagccaaaatgatgaggtttgatgagaaaagtggaaacttttattgtactgagcttgga
cgggttgcaagtcacttctatattcagtactctagtgttgaaacatacaacgaaatgttg
aagcggcacatgaatgaaagcgagataattgatatggttgctcattcttctgaatttgaa
aatattgtggtaagagaggaagagcagcatgaacttgagactcttgcacgctcttgctgt
cccttagaagttaagggaggcccttctaacaaacatggaaaaatttcgattctcattcag
ttgtacatatctcgtgggtcaattgatgcattttctctggtctctgatgcttcatatatt
agtgctagtttagcacgtataatgcgtgccctgtttgagacatgtttgcgaaaagggtgg
tgtgagatgactttatttatgttggaatactgcaaggcagttgatcgtcaactgtggcct
catcaacatgctcttcggcaattcgatagggatataccttttgatacattgagaaaactt
gaagagcgaggggccgacttagaccgcttgtatgagatggaggaaaaagacattggagcg
ctgattcgttacaatcctgggggaaggttggtcaagcaacatctagcatattttccttca
attcaactggaagctactgttagtcctatcacccgcactgtgttgaaggtggatttgctt
ataactccagattttatatggaaggatcgctttcatggtgctgctcttcgttggtggatt
ctcattgaggacacagagaatgattatatctaccactcagatcttttcacactaacgaaa
cggatggctagaggggaaccgcagaagctttcttttactgtgcctatatttgaaccacat
ccgccgcaatactatgttcatgctatttctgattcctggttgcatgcagagtctttctac
acaatctctttccacaatcttgcactaccagaggcacgtacttctcacacagagcttcta
gacttgaaacctcttcctgtgacttctcttgggaataggttgtatgaatcgctttacaaa
ttttcacatttcaatccaatacagactcagatttttcatgtcttatatcacacagacaac
aatgttcttgtgggagctccaactggaagtgggaaaactatatctgctgaacttgcaatg
ttgcgtctcttcagtacccagcctgatatgaaggttgtttacatagcaccactaaaagct
attgttcgagaaagaatgaaagattggaaaaagcatcttgttgctccacttggaaaagaa
atggttgaaatgactggagattacaccccagatttagttgctctcttgtctgctgatatc
atcatatctaccccagaaaaatgggacggcattagtcgtaattggcatactcgaagttat
gtaaaaaaggtcggccttgttattttggatgagattcacttgctaggtgccgacagagga
cccatccttgaggttattgtatctagaatgaggtacatatcatcacagacagagcgctct
gttcggtttgttggactttctactgctctggcaaatgcaggtgatttggctgactggttg
ggtgttggggagattggacttttcaattttaaacctagtgtcagacctgtaccaattgaa
gttcatattcagggttatcctggaaagtattactgcccaaggatgaatagcatgaacaag
ccagcatatgcagctatttgcacccattcacctacaaaacctgttcttatctttgtttca
tcgcgtagacagacaaggcttaccgcactggatcttattcagtttgcggcgtcagacgag
catccgcggcaatttctgagtgtatcagaggaagacttgcagatggtcctctctcagatc
actgaccagaacctccgacatacgttgcaatttggcattgggttgcatcatgcaggtttg
aatgaccaggatagatctgtagtggaagagcttttcgtgaacaacaagattcaggttttg
gtctcaacaagtaccttagcatggggagtgaacctaccagctcacttagttattataaag
ggaacagaatatttcgacgggaaaaccaaaagatatgttgattttcctcttacggagatc
ttgcaaatgatggggcgtgcaggacgtccacagtttgatcaacatgggaaagcggttatt
cttgtacatgaacctaaaaaaagcttctacaaaaagttcttgtacgaaccattcccggta
gaaagtagcctgaaagagaagttgcacgatcacttcaatgcagaaatagtctctggaaca
atcggcaacaaagaagacgctgtgcactatcttacatggacttatttgtttcgtagactg
atggctaatcctgcttactatgggctagaaggcactcaagatgaatctgtgtgttcctat
ttatcaagattggtgcaaaacacgtttgatgatctcgaagacagtggatgcctcaaagta
acagaagatagtgtagagcctatgatgctgggtacaatagcatcacagtactaccttagc
tacacgaccgtgtctatgtttggttctaatataggccccgatacatcgctcgaagcattt
ttgcatattttagcgggagcgtctgagtatgatgaacttcctgtgcggcacaatgaggaa
aattataacaaaacactgtcagagaaagttcggtatcgagtggataataaccatttagat
gatcctcatacgaaggcaaatctgctcttccaggcacatttttctcagctggcacttcca
atcagtgattataacacggatctgaagtcagttttggaccaaagcattcgaatcctccag
gccatgattgatatatgcgcaaacagtggatggctcacaagctcactgacgtgcatgcgt
ctcttgcaaatggtcatgcagggcatgtggtccgatcaagattcgtcattatggatgatt
ccatgcatgaacgatgaccttctgggatctctaaccgcaagaggaatccacacgctgcat
cagctattagaacttccaagggaaactctaaaaagtataaccggaaacttccctgcatcc
aaattatctcaggatctccagcgattcccgcgtatacaaatgaatgtgagactccaaagg
aaggatcctgacgggccttcgacgcttgaaatcagattagagaagatatcaaagaggaat
acctcaagggcattggcccctcgtttcccaaaggtgaaagacgaagcgtggtggttggta
cttggtgatacatcgacttctgaactctttgctgtgaagagagtttcgttcactggtcgt
ctgatcacacgcatggagttgcctcccaacataacctctcttcaggatactaaactaatc
ttagtttcggattgttatttgggatttgagcaagaacgctccattgaacaacgacctgcc
cgacgctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (23)   

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