KEGG   Brassica oleracea (wild cabbage): 106327109
Entry
106327109         CDS       T04124                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' alpha isoform-like
  KO
K11584  serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    106327109
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:boe01009]
    106327109
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:boe03019]
    106327109
   03036 Chromosome and associated proteins [BR:boe03036]
    106327109
Protein phosphatases and associated proteins [BR:boe01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     106327109
Messenger RNA biogenesis [BR:boe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     106327109
Chromosome and associated proteins [BR:boe03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     106327109
SSDB
Motif
Pfam: B56 Peptidase_S49_N Rcd1
Other DBs
NCBI-GeneID: 106327109
NCBI-ProteinID: XP_013620601
UniProt: A0A0D3AHM4
Position
C2:678392..680449
AA seq 483 aa
MFKKMMKSGSRKPSRNDAGFDPNSTNMVVNHASRPSPLPPPSPTTTKQPPPMNSIEPLPL
LRDLPPPERQPLFLRKLQICSFHFDFTDSSKNAREKEIKRQTLLELVDYIQSGTTAKIIS
ELCQEEMVKMISSNIFRSLPASAGCWPADAEEDEPYLDPNWPHLQLVYELLIRYVVPSDT
DTKIAKRFIDHSFVSNLLELFETEDPRERDYLKTILHRIYGKFMVHRPFIRKGINNIFYR
FVYETERHSGIGELLEIMGSIINGFALPMKEEHKLFLIRALIPLHKPKPIGVYHQQLAYC
VVQFVEKDYRLADTVIRGLLKFWPVTNCTKEVLFLGELEEVLEATQPVEFQRCMVPLFQR
VARCLNSSHFQVAERSLFLWNSEHIVVLIAQNRSVILPIIFASLEKNTESHWNLAVHGLS
ENIKRMFMEMDPELFEECQQEYEEKQSKSKEVEEQRQSRWRRLDEAVEERERVVGEEDHM
IIS
NT seq 1452 nt   +upstreamnt  +downstreamnt
atgtttaagaagatgatgaaaagcgggagccgaaagccctctcgaaacgacgccggattc
gatcctaactccaccaatatggttgttaaccacgcgtcacgcccttctcctctccctcct
ccttctccaaccaccaccaagcaacctcctcccatgaactcaatcgagcccctcccttta
ctccgagacctccctcctcccgagcggcagcctctcttcctccgaaaactccaaatctgc
tccttccacttcgacttcaccgactcctcgaaaaacgccagagagaaagagatcaaacgg
caaacgctgctcgagctcgtcgattacatccaatccggaaccaccgccaagatcatcagc
gagctttgccaggaagagatggtgaaaatgatctcctcaaacatcttccgctccctccca
gcatccgcgggctgctggcccgcggatgctgaggaggacgagccttacttagaccccaac
tggcctcacttgcagctcgtttacgagctgctgataagatacgttgttccttcggatacc
gacacgaagatcgccaaacggtttatcgatcattccttcgtctctaacctcctcgagctt
ttcgaaaccgaagatcctagagaaagagattatctgaaaaccattctccataggatctac
gggaagtttatggttcatagaccttttattaggaaagggattaacaatatcttctatagg
tttgtttacgagacggagagacacagtgggattggtgagcttctggagattatggggagt
attataaacggtttcgccttgccgatgaaggaggagcataagctgtttttgatcagggcg
ttgatacctttgcataagcctaagccgattggtgtgtatcatcagcagttggcttactgt
gttgttcagtttgttgagaaggattatcggcttgcggatacggtgattagagggttgttg
aagttttggccggtgacgaattgtactaaggaggttttgtttcttggtgagcttgaagag
gttcttgaggctacgcagcccgttgagtttcagaggtgtatggttcctctgtttcagcgg
gttgcgcggtgtcttaatagctctcattttcaggttgcagagcgatctctgttcttgtgg
aacagcgagcacattgtggttctaatcgctcagaaccgaagtgtaatacttcccatcata
ttcgcttcactggagaagaacacagagtctcactggaacctggcggttcacggtctaagc
gagaatataaagaggatgttcatggagatggatcctgagctgtttgaagaatgccagcaa
gagtatgaagagaaacagtccaagtcgaaagaagtggaagagcagcgccagagtaggtgg
aggagattagatgaagcagtggaagagcgtgaaagagtagtaggagaagaggatcatatg
atcatttcttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system