KEGG   Brassica oleracea (wild cabbage): 106327910
Entry
106327910         CDS       T04124                                 
Name
(RefSeq) DNA repair protein RAD4
  KO
K10838  xeroderma pigmentosum group C-complementing protein
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    106327910
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:boe03400]
    106327910
DNA repair and recombination proteins [BR:boe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      106327910
SSDB
Motif
Pfam: BHD_3 Rad4 BHD_1 BHD_2 Transglut_core
Other DBs
NCBI-GeneID: 106327910
NCBI-ProteinID: XP_013621676
Position
C2:4060337..4064817
AA seq 839 aa
MKPLIKTKDSKLSASSRAAVNKVLDRINARGNKKSDDTAQNCDAAKDKGKQTVTDNALED
RERGQFGGCDHDDGDEMNDSDWEDCPIPSPAKSVYVDVDDNKELTIELDDLPPDAKRQKN
TYRATAQDKERAELLHKVHLLCLLARGRIVDNACNDPLIQASLLSLLPSYLTKVPNLGKV
TVRDIAPLLRWVRGNFAVRCTPSSEKSFRTSLAFALESRRGTSEELGALSVALLRALKLT
TRFVSILDVASLKPGADKDESPGQSRAKTKRGIFRNSTLMVPKHQAISSHPNKSSSHVED
KRDNKDNSSSEAGTSSKSDGTRRRGDVEFEMQLAMALAATATVNNQQSSKATEKKKTTKA
SDGLSISDQVMSTAFGSKKVDSPLCWAEVYCNGENMDGRWVHVDAVNGTIDAEQTVEAAA
SACKMFLRYVVAFSGGGAKDVTRRYCTKWHTISSKRVNSSWWDMVLAPLRELEAASSLIP
LANSASSSASGVRSAAEDIELATRALTEPLPTNQQAYKSHELYAIEKWLHKNQILHPKGP
VLGFCAGHSVYPRTCVQTLRTKESWLRDGLQLKANEVPLKILKRNAKIRKVKDFGDGNKE
SEDGSRCMELYGKWQMEPLCLPHAVNGIVPKNERGQVDVWSEKCLPPGTVHLRFPRIFSI
AKRFGIDYAPAMVGFEYKSGRATPVFEGIVVCTEFKDAILEAYAEERELREEEERRRNEA
QAASRWYQLLSSILTRERLKNRYANNSEDDIVKTRSLETKPETVVREENVKTPKKQGGVK
RGRSGGRKSHSEDENYEGGDGDGDEHEHVFLDEEETFDEKTSVKTKRCKCGFSVQVEQM
NT seq 2520 nt   +upstreamnt  +downstreamnt
atgaagcctctaattaaaactaaggatagtaagctatcagcatcctcgagagcagcagtg
aataaggttctagacagaatcaatgctcgtggcaacaagaagagtgatgatactgcacag
aactgtgatgccgcaaaggataaggggaagcaaaccgtaactgacaacgctctagaggac
agggaacgtggtcagtttggtggctgtgatcatgatgatggtgatgagatgaatgattca
gactgggaagactgtcctattcctagtcctgccaaatcggtttatgtggacgttgatgac
aacaaagagttaaccatagagcttgatgatttgcctcctgatgccaagaggcagaagaac
acttaccgggcaacagcacaagacaaggaacgtgcggagcttctacacaaggttcacttg
ctctgtctgcttgcaagagggaggatagttgacaacgcttgtaacgatcccttgattcag
gcttccttgctttcacttctaccgtcatacttgacaaaagtaccaaatctagggaaagtg
actgttagggatatagctcctcttctccgttgggttcgtggaaactttgctgttaggtgt
actccaagctctgagaagtcttttcgtacttctctagcatttgctcttgaatctcgtaga
ggcacttctgaagagcttggagcactctctgttgctttgcttagagcattaaagcttaca
actcggtttgtgtctattcttgatgttgcctccttaaaacctggggccgacaaggatgaa
tctccaggtcaaagcagagctaaaacaaagcgtgggatattcaggaactcaactcttatg
gtaccaaaacatcaagccatctcatcacacccaaacaaatcctcttcccatgttgaggat
aagagagacaataaggacaactcatcttctgaagcaggaacgtcaagcaaatctgacggg
acaaggaggagaggagatgtcgagttcgagatgcaattagccatggctttggctgcaact
gcaactgtaaacaaccaacagagttctaaagcaaccgagaaaaagaaaacaacaaaagca
agtgatggcttgtcgatttctgaccaagtaatgtccacagccttcggttccaagaaagtg
gactcacctctctgttgggctgaggtgtactgcaatggagaaaacatggacgggagatgg
gtccatgtagacgctgttaacggaacaatagatgcagaacaaacggtagaagctgcagct
tctgcttgcaagatgtttcttagatacgtcgtcgccttctccggtggtggagccaaagac
gtcactcgcaggtactgcacaaagtggcacacgatctcatcaaaacgggtgaactcatcg
tggtgggatatggtgttagcaccgttgcgagagctagaggcagcctcaagcttaatccct
cttgctaacagtgcaagtagctcggcctctggtgtgaggagtgctgctgaagatattgag
ttggctactcgggcgcttactgagcctcttcccactaaccagcaggcttataagagtcat
gaactctatgctattgagaaatggcttcacaagaaccagatacttcacccaaaaggtccg
gttctggggttctgcgctggtcattcggtttatcctcggacctgtgtgcagactcttaga
acgaaagagagttggcttcgtgatgggcttcaacttaaggccaatgaagttcccttaaag
attcttaagcgtaacgcaaagattagaaaagtaaaagattttggagatgggaacaaggag
agtgaagatggttctcggtgcatggaactatacgggaagtggcagatggaaccattgtgt
ctacctcatgctgttaatgggattgtgcctaagaacgagcgtggtcaagttgatgtctgg
tctgagaaatgtctaccacctggaacagtccacttaaggtttcctcgaatattttcaatt
gccaagagatttggaatagattatgcacctgcaatggttggttttgaatacaagagtgga
cgtgctactcctgttttcgaaggtattgtggtctgtaccgagttcaaagatgcaatcctt
gaggcatatgcagaagaacgagaattgagagaagaagaggagagaagaagaaacgaagca
caagcagcttcgagatggtatcagcttctttcatctatcttaacccgtgagaggttgaag
aaccgttacgccaataattcagaggatgatattgtcaaaacgaggagtttggaaacgaaa
ccagagacggtcgttagggaggagaatgtaaaaacgcctaaaaagcaaggaggggttaag
agaggaaggtcaggaggaagaaagagtcatagtgaagatgaaaactatgaaggtggagat
ggagatggagatgaacatgagcatgtgtttcttgatgaggaagaaacctttgatgagaaa
acctctgtaaaaaccaaacgctgcaaatgtggcttttctgtccaagtggaacaaatgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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