KEGG   Brassica oleracea (wild cabbage): 106331341
Entry
106331341         CDS       T04124                                 
Name
(RefSeq) endonuclease III homolog 1, chloroplastic isoform X1
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    106331341
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:boe03400]
    106331341
Enzymes [BR:boe01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     106331341
DNA repair and recombination proteins [BR:boe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     106331341
 Prokaryotic type
     106331341
SSDB
Motif
Pfam: HhH-GPD HHH HHH_5 HHH_8 EndIII_4Fe-2S
Other DBs
NCBI-GeneID: 106331341
NCBI-ProteinID: XP_013625126
Position
C3:complement(9569073..9571905)
AA seq 389 aa
MILVNRAVSTTLDNVAWFSRVRTMNRKIHSTVSSSSKANSVRIQHSRSEDSDPETANGAS
GSSETLVYTRKKRLKQEALEPLEKKSQQLCGLPDIEEFAFKKNTRSSKRSTTETNISVAS
ASTAGRSTETIITPTSTKTAGSPPENWVQVLEGIRQMRSSGDAPVDSMGCDKAGSFLPPL
ERRFAVLLGSLLSSQTKDQVNNAAIHRLHQNGLLTPEAIDKADESTIKELIYPVGFYARK
ATYMKKVAKICLEKYNGDIPSSLDDLLALPGIGPKMAHLILHIAWNDVQGICVDTHVHRI
CNRLGWVSRPATKQKTSSPEETRVALQQWLPKEEWVAINPLLVGFGQTICTPLRPRCQAC
SVAKLCPAAFKEASSPSSKLKKSKQSKEL
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgattctcgttaacagagccgtttctacaacccttgacaacgtcgcttggttttctcga
gtccgaaccatgaatcgcaaaattcactccactgtctcttcttcttctaaagccaactcc
gtgagaatccaacattctcgctccgaagattcagacccagaaacagccaatggagcttct
gggtcgtcggagactctagtatacacccggaagaaaaggctgaaacaggaagctttggag
cctctggagaaaaaatcacagcagctatgtggattgcctgatatagaagaatttgctttc
aaaaagaatactagatcatcgaagaggtcaacaacggaaactaacatctctgtggcttca
gccagcacagcagggaggtcaacggaaactataatcactccgacttcaaccaaaacagca
ggaagcccgcctgaaaactgggtacaagtgctcgagggcattcgtcaaatgagatcatct
ggagatgcaccagttgattctatgggatgtgataaagctggaagctttctgcctcctttg
gaaagaagatttgctgtcttgttaggatcacttctttcaagtcagactaaagatcaagtt
aataatgctgcaatacatcgtcttcatcaaaacggccttctcactcccgaagccattgac
aaggctgatgaatcaaccataaaagaactgatctatccggttggcttttatgcaaggaag
gctacatatatgaagaaagtagctaaaatctgtttagagaaatataacggagacattcca
agctctttggacgatctacttgcgcttccggggattggtcccaagatggcacatttgatt
ctgcatatagcatggaatgatgttcaaggtatctgtgtagatacacatgtccatcgcatc
tgcaatcgacttggttgggtgtctcggccagcaaccaaacagaaaacttcgtctccagag
gaaacaagagtagctttgcaacaatggcttccaaaggaagaatgggttgccattaacccg
cttctggtgggatttggacaaacgatttgcacaccgctgagacctcgttgccaagcctgc
agtgttgctaagctttgtcctgctgctttcaaagaggcttcaagtccatcatccaagttg
aaaaaatctaagcaaagcaaagaactatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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