KEGG   Brassica oleracea (wild cabbage): 106331990
Entry
106331990         CDS       T04124                                 
Name
(RefSeq) CDK-activating kinase assembly factor MAT1-like
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03022  Basal transcription factors
boe03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    106331990
  09124 Replication and repair
   03420 Nucleotide excision repair
    106331990
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:boe03021]
    106331990
   03400 DNA repair and recombination proteins [BR:boe03400]
    106331990
Transcription machinery [BR:boe03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     106331990
DNA repair and recombination proteins [BR:boe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     106331990
SSDB
Motif
Pfam: MAT1
Other DBs
NCBI-GeneID: 106331990
NCBI-ProteinID: XP_013625885
Position
C3:complement(61411042..61412728)
AA seq 183 aa
MVLVSNSSHQNKEIHIRRRISEIYNKREEDFPSLKDYNDYLEEVECMVFDLVDGINVEAI
EEKIKKYSQENAEQIMINRARKAEDLTAALAACKAQQPQTDADTSTNNGTTSGTAYSQAP
RPTGMGPQPVPIGGGGGADHQRYSMEDEAMMRLKAERATRAGGFSLEISKKRALEEAFAS
IWV
NT seq 552 nt   +upstreamnt  +downstreamnt
atggtgttggtgtctaattctagccatcaaaacaaggaaattcatatcagaaggagaatc
tctgagatatacaataaaagggaagaggattttccatcacttaaggactacaatgactac
ttggaagaagtggagtgcatggtattcgatctggtagatggaatcaatgttgaggccatt
gaagagaagataaagaagtactctcaagagaatgctgaacagattatgatcaaccgagcc
cgcaaggctgaggatttaactgcagccctggcggcgtgcaaggctcaacaaccacaaact
gatgctgacacgtctacaaacaatgggactacgtctggaactgcatacagtcaggctcca
agaccaacgggaatgggaccacaacctgtacctataggaggaggaggaggagcagatcat
caacgttactcaatggaagacgaagcgatgatgaggctcaaagcagagagagctacacgg
gctggaggattttctttagagataagcaagaagagggctttggaagaagcatttgcaagc
atttgggtttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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