KEGG   Brassica oleracea (wild cabbage): 106335402
Entry
106335402         CDS       T04124                                 
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g18940, chloroplastic
  KO
K17710  pentatricopeptide repeat domain-containing protein 1
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:boe03016]
    106335402
   03029 Mitochondrial biogenesis [BR:boe03029]
    106335402
Transfer RNA biogenesis [BR:boe03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    106335402
Mitochondrial biogenesis [BR:boe03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    106335402
SSDB
Motif
Pfam: PPR_2 PPR PPR_3 PPR_1 PPR_long TPR_14 TPR_12 TPR_19 Clathrin TPR_7 TPR_8
Other DBs
NCBI-GeneID: 106335402
NCBI-ProteinID: XP_013629373
UniProt: A0A0D3BEJ1
Position
C3:complement(34758967..34761643)
AA seq 818 aa
MDAALSPLKPPYPIQSKRPPPPQSSNHSVKFSSATLHLPPPSPSPPSFPLDSLLHHLVHL
SSFPRHANSPAAARFPSLEVKSAKPISSPVLGINGSLKLLCKKETALLNSILDHPLSELS
SFFDSAKSELIRTDVFSLVKALDDSGNWERAVLLFEWLVSASNSGDLKLDHYVIEIVVRI
LGRESQYSVAAKLLDKIPLQEYTLDVRAYTTILYAYSRTGKYERAVNLFERMKEMGPSPT
LVTYNVILDAFGRMGRSWGKIVLVLDVIRSKGMKFDEFTCSTVLSACAREGLLREAKEFF
AEIKSSGYEPGTVTYNALLQVYGKAGVYTEALKILKEMEENDCPADSVTYNELVAAYVRA
GFTKEAAGVIEMMTGKGVMPNAITYTTVIDAYGKSGKEEEALKLFYSMKRAGCVPNTCTY
NVVLSMLGKKSRSNEMVKMLCDMKSNGCSPNRVTWNTMLALCGKKGMDKYVNRVFREMKS
CGFEPDRDTFNTLISAYGRCGSEVDASKMFGEMTRAGFNACVTTYNALLNALARQGDWRS
GEGVISDMKSKGFKPTETSYSLMLQCYAKGGNVLGIERIEKEIVEGQIFPSWMLLRTLLL
ANFKCRALAGMERAFALFKKHGYKPDMVIFNSMLSIFTRNNMYDQAHEILQSIRDHELNP
DLVTYNSLMDMYVRRGECWKAEEILKSLEKSKLRPDLVSYNTVIKGFCRKGLMQEAVRML
SEMTERGIRPCIFTYNTFVSGYTAMGMFGEIEDVIECMAKNKCRPNELTYKMVVDGYCRG
GRYSEAMEFVSKIKTLDAYFDDQSIQRLAVRVRENLES
NT seq 2457 nt   +upstreamnt  +downstreamnt
atggacgccgcactctcccctctcaaacctccataccctattcaatccaagagacctcca
ccacctcagtcctccaaccactccgtcaaattcagctccgccacactccacttacctcct
ccttctccttctcctccttccttccctctcgattcccttctccaccacctcgtccacctc
tcttcctttccccgacatgccaactcacccgccgcagctcgtttcccttctctcgaggtc
aaatcggcgaaacccatctcgagtcccgttctgggtatcaacgggtctttgaagctactg
tgtaagaaggaaactgcgttactcaactccattttggaccaccctttgtctgaattgagc
agcttcttcgattccgcgaagtccgagctgattaggaccgatgtgttcagtctcgtcaag
gctctggacgattccgggaactgggagagagcggttttgctgttcgaatggctagtttcg
gcttcgaattcaggagatttgaagctagatcattatgttatagagattgtagttaggatc
ttaggtagagagtctcagtactccgttgcagctaagctgctcgataaaattcctctgcag
gaatacacgttagatgtccgcgcttacacgaccatcctctacgcttattcgcgtacaggg
aagtacgaaagagcggtcaatctcttcgagaggatgaaagagatgggcccttcgcctact
ctggtgacttacaatgtgatcctcgatgctttcgggagaatgggaaggtcttgggggaag
attgtactagttttagacgtgattagaagcaaagggatgaagtttgatgagttcacttgc
agcactgtgctgtccgcttgtgcgagagagggtttgttaagagaggcgaaagagtttttc
gccgagattaagtcaagcggatacgagcctgggactgtgacttacaacgcgctgttgcaa
gtttacggtaaagcgggggtttacacggaagcgttaaagattttgaaagagatggaggag
aacgattgtcccgcggattccgtgacgtacaatgagcttgttgcggcttatgttagagct
ggtttcaccaaggaagctgccggggtcatcgagatgatgacggggaaaggtgtgatgccg
aacgcgatcacttatacgactgtgatagatgcgtatgggaagtcggggaaggaggaggag
gctttgaagctgttttacagtatgaagagagctgggtgtgttccgaacacttgcacctac
aacgtggtgcttagtatgctggggaagaaatcgagatctaacgagatggtgaagatgtta
tgcgacatgaagtctaacggatgctctccgaatagggttacttggaacacgatgctcgct
ctgtgtgggaaaaagggtatggataagtacgtgaaccgagtgttccgcgagatgaagagc
tgcggtttcgagcctgatagggacacgttcaatacgctgatcagcgcctacgggaggtgt
ggctcggaggtcgatgcgtcgaaaatgttcggggagatgacgagagcagggttcaacgct
tgcgtcacgacttacaacgcgttgcttaacgccttggctagacaaggggactggagatcg
ggagagggcgtgatctccgacatgaaaagcaaaggtttcaaaccgacggagacgtcttac
tcgttgatgcttcagtgttatgccaagggagggaacgtgctagggatagagaggatcgag
aaggagatagtcgaggggcagatcttcccgagctggatgcttctgagaactctgcttctc
gcaaacttcaaatgcagagcgcttgctgggatggagagagccttcgcgctgtttaaaaag
cacggatacaaacccgacatggtgattttcaactcgatgctctccatcttcacaaggaac
aacatgtacgaccaagcgcacgagatcctgcagtccatccgcgaccacgagctaaacccc
gatctcgtgacctacaacagcctcatggacatgtacgtaagacgtggagagtgttggaaa
gccgaagaaatcctcaagagtctagagaaatcgaagctaagaccggacctcgtctcttac
aacacggtgatcaaggggttctgcaggaaagggctgatgcaagaagcggttaggatgctg
tctgagatgacggagcgtgggatcagaccgtgtatcttcacttacaacacgtttgtttcg
ggttacacggcgatggggatgtttggggagatagaggatgtgatcgagtgtatggcgaag
aataagtgcagaccaaatgagttgacgtataaaatggttgtggatggttattgcagagga
gggaggtatagcgaagctatggagtttgtatcaaagattaaaactcttgatgcttacttt
gatgatcagtccatccaacggctagccgttcgagtacgtgagaatttagaatcctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (22)   

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