KEGG   Brassica oleracea (wild cabbage): 106337275
Entry
106337275         CDS       T04124                                 
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase, chloroplastic-like isoform X1
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    106337275
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:boe03400]
    106337275
Enzymes [BR:boe01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     106337275
DNA repair and recombination proteins [BR:boe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     106337275
SSDB
Motif
Pfam: Exo_endo_phos SAP Exo_endo_phos_2 DUF2458
Other DBs
NCBI-GeneID: 106337275
NCBI-ProteinID: XP_013631817
Position
C4:51526010..51529013
AA seq 488 aa
MNKVLQLGLQSSVVQAAKFLVVVPFRSLRFASSIVGVRVGTSSFNKRLMSNATAKSVPLS
INNIKGKPMKGSDNDIEAMTVQELRARLRKLGLPVKGLKKELISTLQLHMDNSSPDESSG
AEKETTSSTLSETVTIKRKIRNQEEANDDAYGNDNGEKKVKQSTEKNLKVKVSSKEEEAS
LTIAISSSNQSEPWTVLAHKKPEKDWKAYNPKTMRPPSLPEGTKSVKIMTWNVNGLRALL
KLESFSALQLAQREDFDVLCLQETKIQVKDVEEIKKALIDGYDHSYWSCSVSKLGYSGTA
IISRIKPLSVRYGTGLSGSDHDMEGRIVTAEFDSFYLINTYVPNSGDGLKRLSYRVEEWD
RTLSNYIKELEKSKPVILTGDLNCAHEEIDIYNPAGNKRSAGFTIEERQSFGENFLEKGF
VDTFRKQHPGVVGYTYWGYRSGARKTNRGWRLDYFLVSESIAANVHDSYILPDVNGSDHC
PIGLILKL
NT seq 1467 nt   +upstreamnt  +downstreamnt
atgaacaaggttcttcagttaggtctccagagctccgtcgtccaagccgccaagtttctg
gtggtggtgccctttaggagcttaagatttgcttcatcaatcgttggtgttagagtagga
acaagtagtttcaacaagagacttatgtcaaatgctacagcaaagtctgtacctttatct
atcaacaacatcaagggaaagccaatgaagggaagtgataatgacattgaggcgatgacg
gttcaagaacttagagccagattgaggaaacttggactacctgtgaagggactcaaaaaa
gaacttatctcaactttacaacttcatatggacaacagttcaccagatgaaagttctggt
gcagagaaggagactacttcatccaccctttcagagactgtcactatcaaaagaaaaatc
agaaaccaggaagaggctaatgatgatgcttatggcaatgacaatggagagaagaaagtt
aaacagtctactgagaaaaacttgaaagttaaagtttcttcaaaagaggaagaagcatca
ctgaccattgccatctcatcctccaatcaaagtgaaccgtggacggtacttgctcataag
aagcctgagaaagactggaaagcttacaacccaaagacaatgagacctccttctctacca
gagggtaccaagtctgtgaagatcatgacttggaacgttaatggactgagagctttattg
aagttagagagcttctctgctcttcagcttgcacaaagagaagattttgatgtgttgtgc
ttacaggagactaaaatccaggtgaaggatgttgaggagatcaagaaagctcttattgat
ggatatgatcatagttactggtcctgcagcgtctctaagcttggttactctggaactgct
attatctcacggataaaaccactctcggttagatatggtactggtctatctggatcagac
catgacatggaaggacgcattgtgactgctgagttcgactcattctacttgataaacact
tatgttcctaactccggagatggcttgaaaagactgtcatacagggttgaagaatgggat
cgaactctcagtaattatatcaaagagctggagaagtctaaacctgtaatcttgactggt
gatttaaactgtgctcatgaagaaatcgacatctacaatcctgcggggaacaaaagaagt
gctggtttcacaatagaagaaagacaatcatttggagaaaacttcttggagaagggcttt
gtggatacctttagaaagcagcatcctggtgttgttggttatacttattggggttatcgc
agtggtgcacgcaaaaccaatagaggatggagactggactacttcttggtgtctgaatca
attgcagccaatgtccatgattcttacattctccctgatgtcaatggcagtgatcattgc
cctattggccttattctcaagctctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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