KEGG   Brassica oleracea (wild cabbage): 106339923
Entry
106339923         CDS       T04124                                 
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit, cytoplasmic-like
  KO
K01889  phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    106339923
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:boe01007]
    106339923
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:boe03016]
    106339923
Enzymes [BR:boe01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.20  phenylalanine---tRNA ligase
     106339923
Amino acid related enzymes [BR:boe01007]
 Aminoacyl-tRNA synthetase
  Class II (U)
   106339923
Transfer RNA biogenesis [BR:boe03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    106339923
 Prokaryotic type
    106339923
SSDB
Motif
Pfam: tRNA-synt_2d PheRS_DBD3 PheRS_DBD1 tRNA_synthFbeta tRNA-synt_2 tRNA-synt_2b MC4 Raf1_N
Other DBs
NCBI-GeneID: 106339923
NCBI-ProteinID: XP_013634246
Position
C4:complement(40038272..40041597)
AA seq 490 aa
MAEEAILGFLQNNDEIAHSGYFAAEHNLDHEEVKNVIKSLQAFRYIEAKVLKREFFDLTD
EGKKYAAEGSPEFHFFSAVPEEGTISMDDLQRMLDPFVFDVGSKQAPKKKWVAMGQQVSR
TVQHVEDKVKEMLLQIQQGLELDQETLKSLKYRKLIILTEKWSGYSEVKKGPNYAPKRRS
LATDLTRENLQNWQELDFKEYNVNAKGQPVDSGHLHPLLKVRKQFKDIFCQMGFEEMPTN
NFVESSFWNFDALFQPQQHPARDSHDTFFLKAPWTTRELPEDYVARVKQVHESGGYGSRG
YNCEWKREEANKNLLRTHTTAVSSRMLYALAKGPFTPKKYFSIDRVFRNEAVDKTHLAEF
HQIEGVVCDRGLTLGDLIGVLQEFFSRLGMSNLRFKPAYNPYTEPSMEIFSYHAGLEKWV
EIGNSGMFRPEMLQPMGLPEDVRVIAWGLSLERPTMILYKCDNIRELFGHKVDLKKVKEN
PICRIGIESA
NT seq 1473 nt   +upstreamnt  +downstreamnt
atggcggaggaggcgattctagggttcctgcagaacaacgatgaaatcgcacattcaggt
tacttcgcggccgagcacaacctcgatcacgaagaagttaaaaacgtcatcaagagctta
caggcttttcgctacatcgaagctaaggtgcttaaacgggaatttttcgatttgactgat
gaagggaagaaatatgcggctgaagggtcgccggagtttcactttttctcggctgttccc
gaggaaggtaccatatcaatggatgatctacagagaatgctagatccttttgtattcgat
gttggaagtaaacaagctccaaagaaaaagtgggttgcaatgggacagcaagtctctaga
acggttcaacatgttgaagataaagtgaaggagatgcttttacaaatacagcaaggactg
gaacttgaccaagaaactctcaaatctctcaaatacaggaaactcatcatattgacagag
aaatggagtggctattctgaagtaaagaaaggtcccaactatgctcccaaaaggaggagt
ttggccactgatttgactcgagaaaatctacaaaattggcaagagttagatttcaaggag
tataacgtcaatgctaagggacagcctgttgattctgggcatctccacccccttctaaag
gtgcggaagcagttcaaagacatattttgtcagatggggtttgaagagatgccaacaaac
aactttgttgagagcagcttctggaattttgatgcactgttccaaccgcagcagcaccct
gctcgtgactctcatgacaccttctttctgaaagctccttggacgacaagggaattacca
gaagattatgttgcaagggtgaaacaagttcatgagtctggtggatatggatcgcgaggg
tataattgtgagtggaaaagagaggaagcaaacaaaaatcttctccgtacccacacaacg
gcagtgtcgtctaggatgctttatgcactcgcaaagggaccattcactccgaagaagtac
ttttcaatagaccgtgtcttcagaaacgaggctgttgacaaaacccatctggcagagttc
catcagattgaaggtgtggtctgtgatcgtggtcttacattgggtgatctcattggtgta
ttacaagaattcttctctcgattagggatgtccaatctacgtttcaagcctgcatacaac
ccatacactgaaccaagcatggagattttcagctaccatgcaggactagagaaatgggta
gagattggaaactctggcatgttcagacctgaaatgctacaaccaatgggtcttccagag
gatgttcgagtcattgcatggggtctctctcttgaaagaccaacaatgatcttatacaaa
tgtgacaacatccgcgagctgtttggacacaaggtggatcttaaaaaagttaaagagaat
cccatctgtcgcattggaatcgaatcagcatga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (28)   

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