KEGG   Brassica oleracea (wild cabbage): 106342266
Entry
106342266         CDS       T04124                                 
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 3
  KO
K18999  RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16]
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:boe01009]
    106342266
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:boe03021]
    106342266
Enzymes [BR:boe01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     106342266
Protein phosphatases and associated proteins [BR:boe01009]
 HAD phosphatases
  Fcp/Scp phosphatases
   106342266
Transcription machinery [BR:boe03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     106342266
SSDB
Motif
Pfam: NIF BRCT PTCB-BRCT
Other DBs
NCBI-GeneID: 106342266
NCBI-ProteinID: XP_013636597
UniProt: A0A0D3BSE4
Position
C4:9635173..9639992
AA seq 1195 aa
MGNDDDLIVLAAGVEDGEIASASGNASIEVRQSTVADGGDVDVGGVTGGGRGGGFDGNSR
VWTMRDLMTKYPEYRGYANSGLSNFAWAQAVQNKPLSEGLGKEYETREGGGGDKIVIEDS
DDEKEEGELEEGEIDLDSTRDDEMETESLVVLTSVADELEDDRVRKERELETKVKLIRDV
LESTSLVQAQIAFEGVCSRLLGALESLRELVSDNDDFPKRDTLMQLSFASLQTINSVFTS
MNNMSKELNKDTMSRLVSLVNDHCSRFLSSNQRIEIEAMNQNLRRSAISLSAGASSEENV
NRMTQTSNGDLFPAKNLSTEGTRRGAFYARSRLPLLDLHMDHDADSLPSPTRETTPSLPV
NGRHMMARPGFPFGKEGQTSEVAKVHHPYESEALKAVSNYQKKFGVNSLFKTDDLPSPTP
SGEPNDGNGGTGGEVSSSVVASKKPGTLMTYGQDVPLPSTFSSRSMPVVSSTVPPHPLSI
YGMSTPAGATQTVLASDQTVKPSAKSRDPRLRLAKPDGAASVTISPRVVPSAELVNQRKQ
KATSELFIDGPTWKRKKSDNDAQKATNIGGWLEDTESSGHPKLESKPRLIEAGVTSMKTS
VMPTNAVTVTPKVTTATSTEALSSLFKDFAENPTMLNPTMIMNILKMGQKQTVPEKAPQK
PMDPRRAAQLPGSSSVPPVVAPPVSIPASNALPANFPQPGAPKDESGSIRMKPRDPRRIL
LGSTLQRTDSVAEKQSKLNDSSTLKGKTEVLETPSQLVPRQSISLNGTSNMRVSGEPVRG
KTPDFTKNLKNVADMSVLSQQVGNPLATTHAADLKTDKDQEESASVSAASVTAAAGPTRS
MNSWGDVEHLFEGYDDKQRVAIQKERTRRLEEQKKMFGSKKLSLVLDLDHTLLNSAKFHE
VETAHEAMLRKKEEQDRDKPYRHLFRFPHMGMWTKLRPGIWNFLEKASKLYELHLYTMGN
KLYATEMAKLLDPEGVLFNGRVISKGDDGDPLDGDERVPKSKDLEGVMGMESSVVIIDDS
VRVWPHNKMNLIVVERYTYFPCSRRQFGLLGPSLLEVDFDERPEEGTLASTLAVIERIHK
NFFSHTSLDEADVRNILASEQRKILAGCRIVFSRIFPVGEANPQLHPLWQTAEQFGAVCT
TQADEHITHVVTNSLGTDKVNWALSRGKFVVHPGWVEASAFLYQRANESNFAIKP
NT seq 3588 nt   +upstreamnt  +downstreamnt
atggggaacgacgatgatttgattgtgttggctgcgggtgtagaggacggagagatcgct
tctgcgtcgggtaacgcttcgattgaagttaggcagagtacggtggctgatggcggagac
gtcgatgttggcggtgtgacgggaggaggaagaggaggaggatttgacggcaattctagg
gtttggacaatgcgtgatttgatgacgaagtatcctgagtaccgcggatacgcgaactcg
ggtttgtcgaatttcgcttgggcgcaagctgtgcagaacaagccgctgagtgaaggtttg
gggaaggagtatgagacgagagagggtggtggtggtgataagattgtgattgaagacagt
gatgatgagaaagaggaaggagagttggaggaaggggagattgatttggactctacgaga
gatgatgagatggaaactgaatctcttgttgtcttgacaagtgttgctgacgaattggaa
gatgatagggttcggaaggagagagagttggagaccaaagtgaaactgatccgtgatgtg
ttggagagtacgtccttggttcaagcgcagatagcatttgaaggagtgtgttctagactt
ttgggggctttggagtctttgcgagagcttgtttctgataatgatgattttcctaagagg
gatactttaatgcaattgtcgtttgcttctcttcagaccataaactccgtgtttacctcc
atgaacaatatgtccaaggagcttaataaggatactatgtcgagattggtatctctggta
aatgaccattgttccaggtttctctcatctaaccagagaattgagatagaggccatgaat
caaaacctaagacgctctgctatttcacttagcgctggagccagtagtgaggagaatgtt
aaccgaatgactcagacaagtaatggtgacttgtttcctgcaaagaatctgtctacagaa
ggtactcgtagaggagccttctacgcaaggagcaggctgcctctgctagaccttcacatg
gaccatgatgcagacagccttccatcgcccacaagggaaacaacaccaagtttacccgta
aatggtcgccatatgatggctagaccaggtttcccctttggtaaagagggccaaacgagt
gaagttgccaaagtccatcatccatatgagagtgaggcccttaaagcagtttcgaattac
cagaaaaaatttggagttaattcattatttaaaacggatgaccttccaagtccaacaccg
tcaggagaacctaatgacggcaatggaggcactggtggcgaagtttctagctctgttgtt
gccagtaaaaagccggggactctcatgacttatgggcaagacgttcctctgccctccact
tttagttctagaagcatgcctgttgtatcgagcactgttccaccacatcctttgtccatt
tatggtatgtctacaccagctggtgcaactcaaacagttcttgcatctgatcagacagtg
aaaccttctgcaaagagtcgagatccaagactacggcttgcaaaacctgatggtgccgcc
agtgtaaccattagtcctagagtagtgccttctgcagaattggtgaaccaaagaaagcaa
aaagccaccagtgaactttttattgatgggcctacatggaaaagaaaaaagagtgataat
gatgcgcaaaaggctactaatattggtggctggctagaggatacagaatcatcagggcac
ccaaaactggaatccaagcctaggctgattgaggccggagtaacatctatgaaaacaagt
gttatgcccacgaatgctgtcactgtgactccaaaagtaactacggcaacttcaactgaa
gcactgtcatctctttttaaggattttgcagaaaatcctacaatgcttaatcctacaatg
attatgaatatccttaaaatgggacaaaagcaaacggtacctgaaaaagctcctcagaag
ccaatggatccaagaagagcagcacaacttcctggctcttcttccgtaccaccagtggta
gctccaccagttagtatacctgcatcgaatgctttacctgctaattttccacagccagga
gcgcctaaggacgaatctggaagcattcgcatgaaaccacgtgatcctcgccgaatcctg
cttggaagtactcttcaaagaacagactctgtggcagagaaacagtccaaactaaatgac
tcctccactctgaagggtaagacagaagtgttagaaacaccttcccagctcgttccacgg
cagagtattagcctgaatggtaccagcaacatgagagtttctggtgaacctgtcagagga
aagacacctgacttcaccaaaaatctgaaaaatgttgctgatatgtctgtcttatcacaa
caagttggcaatccattagcaactacacatgcagcagaccttaagacagacaaagatcag
gaggagagtgcgtcagtttcagcagcatccgtaacggctgcagctggtcccactcgttcc
atgaacagttggggagatgtggaacacctgtttgaaggatatgatgacaagcagagagta
gctatccaaaaagagagaactcgaaggttagaggaacagaagaaaatgtttggatcaaaa
aagctctctcttgtcttagatttagaccacacccttctcaactcagctaagtttcatgag
gttgaaaccgcccatgaggcgatgttgaggaagaaggaagaacaagatcgtgacaaacca
tatagacatctctttcgcttcccccacatgggaatgtggactaaactgagaccagggatt
tggaattttttggagaaggctagcaagctgtacgagttacatctttacactatgggcaac
aaattgtacgctacagagatggccaaactgcttgatcctgaaggggttctgtttaatggg
cgagtcatatcgaaaggagatgatggagatcctcttgatggagatgaaagagtacccaag
agcaaagatttagaaggagttatgggcatggaatcgtctgttgtgatcatagacgactct
gtgcgagtgtggcctcataacaaaatgaacttaatagttgttgaaagatatacttatttt
ccttgcagtagacggcagtttgggcttcttggtccttctcttcttgaggtagatttcgat
gagcgacctgaggaaggcacattggcatctacattagcggttattgagagaatacataaa
aacttcttctctcacacttcactagacgaagcagatgtgaggaatattttagcttccgag
caacggaagatcttggctggttgtcggattgtgtttagtcggatatttccagtgggtgaa
gccaacccgcagttgcatcccttgtggcagactgctgagcagtttggtgctgtctgcaca
acacaggctgatgaacatatcactcatgttgtcacaaactctctcggaactgacaaggtg
aattgggcactaagcaggggtaaatttgttgttcatcctggctgggtggaagcatcagcg
tttctgtaccagagagcaaacgaaagcaattttgccatcaaaccttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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