KEGG   Brassica oleracea (wild cabbage): 106342760
Entry
106342760         CDS       T04124                                 
Name
(RefSeq) 20S-pre-rRNA D-site endonuclease nob1
  KO
K11883  RNA-binding protein NOB1
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    106342760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:boe03009]
    106342760
   03051 Proteasome [BR:boe03051]
    106342760
Ribosome biogenesis [BR:boe03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    106342760
Proteasome [BR:boe03051]
 Eukaryotic proteasome
  Assembling factors
   Other assembling factors
    106342760
SSDB
Motif
Pfam: PIN_6 NOB1_Zn_bind DZR_2
Other DBs
NCBI-GeneID: 106342760
NCBI-ProteinID: XP_013637237
UniProt: A0A0D3C0E6
Position
C4:complement(38275419..38277723)
AA seq 573 aa
MDPKPASMWSSIVKKDPPSKPPTTDVAPSAILGMVGNCKSTKGISMAVVDANAVIDGSQS
LTNFTDKFVTVPEVLSEIRDPNSRRRLEFIPFTIETMEPSPESLSKVIKFAKATGDLQTL
SDVDLKLIALTYTLEAEVHGTKNLRDVPPPIQTVRVKRLPEKELPGWGSNVANLEEWEAL
ENETEEKSNTTSKILPLKDLNMNILPPSDSCSEVGDVASQTEGQEEDEEEGGRRQKRYPP
KKTEVKIEGKMVVEGIDASQGGNDDDEDGGGEWRPAVSSSTHRKFLRRKAKWEHYNALAE
QEFQKDQEADKAGEKKCAKDSGKDDEELSSILKGIRLEEDSLKALQEEPEETNGEDDAEV
DIASEGGDTFEASSMADDGSSEQSWSLRALSESSVACITGDYAMQNVIIQMGLRLLAPGG
MQIRQLNRWVLTCHACYTVTPEIGRIFCPKCGNGGTLRKVAVTIGENGTIIAARKPRVTL
RGTKFSIPMPKSGRDAITKNLVLREDQLPQKYLHPKTKKKASKAGDEYFISDDVFMNHHS
DKKAPLQPPVRKAMAVFSQKRNPNDNHYSRSMH
NT seq 1722 nt   +upstreamnt  +downstreamnt
atggatccgaagccagcatcgatgtggagttccatagtgaagaaagatcccccctcaaag
cctccgacaaccgacgtagctccgtcggcgattctcggcatggtcggaaactgcaaatcc
acaaaggggatatccatggcggtcgtcgacgccaacgccgtcatcgacggtagccagagc
ttaaccaacttcaccgacaaattcgtaaccgtccccgaagtactctcggagattcgtgac
cctaactctcgtcgtcgtctcgagttcatacctttcaccatcgaaaccatggagccttct
cctgaatccctcagtaaagttattaaatttgctaaagctactggagacttgcaaacactc
tctgatgttgatcttaagttgattgctttgacgtacacgctcgaggctgaggttcatggg
accaagaatcttagagatgttcctccgcctattcagactgttagggttaagagattacct
gagaaggagttgcctggatgggggtctaatgtggctaacttggaggagtgggaggcgcta
gagaacgagactgaggagaaatcgaacactacttccaagatccttccgcttaaagacctt
aacatgaacatccttcctccctcggacagctgttctgaggttggtgatgttgcgtctcag
acggagggtcaagaagaggatgaggaggaaggcgggaggaggcagaagaggtacccgcct
aagaaaacagaggtgaagattgagggtaagatggtggtggaaggaatagatgcatctcag
gggggaaatgatgatgatgaagatggtggtggtgaatggaggcctgcggttagtagcagt
actcacaggaagttccttaggagaaaggccaagtgggaacattacaatgccttggctgag
caagaatttcagaaagatcaagaagctgacaaagctggtgaaaagaagtgtgcaaaagat
agcggaaaggatgatgaagagctttcgtccatcttgaaaggtattaggttggaggaagac
tcattaaaggctctccaagaagaacctgaagagacgaatggtgaggatgatgctgaagtc
gacattgctagtgagggtggtgatacctttgaggcatcgtcgatggcagatgatggtagc
agcgagcagagttggtcgttgagagccttatctgagtccagtgtagcttgtataactggt
gactacgcgatgcaaaatgttattattcaaatgggtttgcgtttgcttgcacccggaggt
atgcaaattcgccaactaaacaggtgggtgttgacatgccatgcttgctacacagtaact
cctgaaattggaagaatcttctgtcccaagtgcggtaatggcggcactctgcgcaaagta
gcggttacaataggcgagaatggcaccatcatagctgcacgtaaaccacgtgtaacactt
cgagggactaaattttcgataccgatgcctaaaagcggaagagacgcaatcaccaagaat
ctggttctaagggaagatcaacttcctcaaaagtacctccatcccaagaccaagaagaaa
gcaagcaaagcgggagatgagtattttatatcagacgatgtgttcatgaaccatcacagt
gataaaaaggcaccattgcagcctccagtgagaaaagctatggccgttttcagtcagaaa
cggaaccctaatgacaaccattactcgcgttctatgcactga

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