KEGG   Bordetella sp. H567: AKI39_17430
Entry
AKI39_17430       CDS       T04979                                 
Name
(GenBank) pseudouridine synthase
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
boh  Bordetella sp. H567
Brite
KEGG Orthology (KO) [BR:boh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:boh03009]
    AKI39_17430
Enzymes [BR:boh01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     AKI39_17430
Ribosome biogenesis [BR:boh03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    AKI39_17430
SSDB
Motif
Pfam: PseudoU_synth_2 S4 TruB_N
Other DBs
NCBI-ProteinID: AOB32114
UniProt: A0A1B2R586
Position
complement(3876288..3877247)
AA seq 319 aa
MSELAASADLPSDDEPQILRVPETVQADRLDKVLSGLLAEHSRSRLQGWIEAGYVQVNGA
PAKVRQPVGPGDLIAVWEQPAPDAQAFEPEPVDFRVVADSPAWIVVDKPAGLVTHPGAGN
WRGTLLNGLLFRYPELRGVARAGIVHRLDKDTSGLLVVARTEQAQTHLVRQLQARTMGRE
YVALVHGWLAGPGTVDRPVGRDARVPVRMSVERPIAPKHAVTHYAPEAAGLAGETRASRI
ACRLETGRTHQIRVHLASLGHPLLGDTLYGGKAVAGATRQMLHARALRFDDPAGTGPLSF
EAPPPSDMAAVCQAIAWNA
NT seq 960 nt   +upstreamnt  +downstreamnt
atgtccgagttagccgccagcgcggatcttccttccgatgacgaaccgcaaattctgcgc
gtcccggaaaccgtccaggccgaccggctggacaaggtgctttccggtctcttggcagag
cactcccgcagccgcctgcagggctggatcgaggccggttacgtgcaggtgaacggcgcg
cccgccaaggtacgccagcccgtcggccccggcgacctcatcgccgtgtgggagcagccc
gcgcccgatgcccaggctttcgagcccgaacccgtggatttccgcgtcgtggcggacagc
ccggcctggatcgtcgtcgacaagcccgccgggttggtgacgcatcccggcgccggcaac
tggcgcggcacgctgctcaacggtttgctgttccgctatcccgaattgcgcggggtggca
cgggccggcatcgtccatcgcctggacaaggacacctccggcttgctcgtcgtggcgcgc
accgaacaggcgcagactcacctggtacgccagctgcaggcgcgcaccatgggccgcgaa
tacgtcgcgctggtccacggctggctggccggtcccggcacggtggaccggccggtgggc
cgcgatgcccgcgtgccggtgcgcatgagcgtggagcgccccatcgcgcccaagcatgcc
gtcacgcattacgcgcccgaagccgccggcctggccggcgagacgcgcgcatcgcgcatc
gcatgccgcctggaaaccggccgcacgcaccagatacgcgtccacctggccagcctgggg
caccccttgctgggcgataccttgtatggcggcaaggcggtggcgggggcaacacgccag
atgctgcacgcgcgcgccctgcgcttcgacgacccggccggcaccgggccgttgtccttc
gaggcgccgcccccttccgacatggcggccgtttgccaggcgatcgcctggaacgcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system