KEGG   Bordetella sp. H567: AKI39_23310
Entry
AKI39_23310       CDS       T04979                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
boh  Bordetella sp. H567
Pathway
boh03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:boh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AKI39_23310
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:boh03400]
    AKI39_23310
Enzymes [BR:boh01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     AKI39_23310
DNA repair and recombination proteins [BR:boh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     AKI39_23310
 Prokaryotic type
     AKI39_23310
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AOB33051
UniProt: A0A1B2R7U1
Position
5207936..5208688
AA seq 250 aa
MENRLRTPLSVLASQLPPEWAPALATPAAARALPEICGHVDRRVEAGITVYPCAPFRVLE
LLRPRDVKVVILGQDPYHGPGQAQGLAFSVPDGCKRPPSLRNIFKEIAAEYPDKGIPAGN
DLTPWVEQGVLLLNTSLTVEDGQPASHAKRGWEAITDALISLVARQPQPKVFMLWGAHAQ
SKRALLPQDHNTLVLMANHPSPLSASRPPAPFLGCGHFRQANEWLLTRGQEIVDWGLPQK
TLAPQLQFGL
NT seq 753 nt   +upstreamnt  +downstreamnt
atggaaaaccgtctccgtacccccttgtccgtattggcttcccaactgccgccggagtgg
gcgcctgccctggccacccccgccgccgcgcgggcattgccggaaatctgcggccacgtc
gaccgccgggtcgaggctggcatcaccgtctatccctgcgcgcccttccgggtgctggag
ctgctacggccgcgcgacgtcaaggtggtgatcctgggccaggacccctatcacggcccc
ggccaggcccagggactggcgttttccgtcccggacggctgcaagcggccgcccagcctg
cgcaatatcttcaaggaaatcgccgcggagtacccggacaagggcataccggcgggcaac
gacctcacgccctgggtagagcaaggcgtgctgctgctgaatacctcgctcacggtagag
gacggacagcccgcctcgcacgccaagcgcggctgggaggccatcaccgacgccctgatt
tcgctggtggcccgccagccacagcccaaggtgttcatgctgtggggcgcgcacgcccag
tccaagcgcgcactgttgccacaggaccacaacacgctggtgctgatggccaaccatccg
tcgcccctgtccgcatcgcgtccacccgcgccgttcctgggctgcggccatttccgccag
gccaatgagtggcttctgacgcgcggacaggaaattgtcgattggggtttgccccagaaa
acgctggcgccgcagcttcagttcgggttatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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