KEGG   Bordetella sp. J329: CBF45_14020
Entry
CBF45_14020       CDS       T05850                                 
Name
(GenBank) hypothetical protein
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
boj  Bordetella sp. J329
Pathway
boj03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:boj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CBF45_14020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:boj03400]
    CBF45_14020
Enzymes [BR:boj01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     CBF45_14020
DNA repair and recombination proteins [BR:boj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CBF45_14020
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AZV95609
Position
complement(3162964..3163917)
AA seq 317 aa
MGVGRWLLPEPPRRPAPPADAGAQVATAAAAPSGPAEARRPADDASGQVRRSGAGDALAL
LAAGRDRQAGRPAAARPGAPAAVSLAQPPQAGQSVAQAPAQRVDQLAPGRPAAQPGGEPV
VMAERGPLAQDMEGLREQVLACTACDLCKTRRQAVFGDGAFPARWMVIGEAPGEQEDRQG
SPFVGRAGQLLDSMLAAVDLQRGREVFIANVIKCRPPANRNPRPEEIAACSPYLMKQIEL
IKPEGILVLGRFAAHTLLQTEASIGNLRGRVHAWRDGSGRDIPLVVSYHPAYLLRSPHAK
AAAWQDLRLAVAQAPQG
NT seq 954 nt   +upstreamnt  +downstreamnt
atgggcgttgggcgctggctgttgcccgagccgccgcgccgtccggcaccgccggccgat
gctggcgcgcaggtggcgacggcagccgctgcgccgtcaggcccggccgaagcccgccgg
cctgcggacgacgccagcggccaggtacgtcgcagcggtgctggcgatgcgctggctctg
ctggctgccggtcgtgacaggcaggcgggccgtccggccgccgcgcgccctggtgcgcct
gcggcagtgtccctggcgcagccgccacaagccggacagtccgtggcccaggcgccggcg
caaagagtggatcagctggcgccgggacgcccggcggcccagccgggcggtgagcctgtc
gtgatggcggagcgtgggccgttggcccaggatatggagggcctgcgcgagcaggtgctg
gcctgtactgcctgcgatctatgcaagacgcggcgccaggcagtatttggcgacggcgct
ttcccggcacgctggatggtgatcggcgaagcgccaggggagcaggaagaccgtcagggt
tcgccgtttgtcgggcgggccgggcaattgctggattccatgctggccgccgtcgacctg
caacgcgggcgcgaggttttcattgccaatgtgatcaagtgccggccgccagcgaaccgc
aatcccaggccggaagaaatcgccgcgtgcagtccttatctgatgaagcagattgagctg
atcaagcctgaaggcattctggtgctggggcgctttgccgcccacacgctattgcagact
gaggcttccattggcaatctgcgcggccgtgtacacgcatggcgcgatggcagtggtagg
gatattccgctggtggtcagctatcacccggcctatctgttgcgcagccctcatgccaag
gcagcggcctggcaagacttgcggctggcggtggcgcaggcgccgcagggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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