KEGG   Bos mutus (wild yak): 102286064
Entry
102286064         CDS       T02919                                 
Symbol
UPF3A
Name
(RefSeq) UPF3 regulator of nonsense transcripts homolog A (yeast)
  KO
K14328  regulator of nonsense transcripts 3
Organism
bom  Bos mutus (wild yak)
Pathway
bom03013  Nucleocytoplasmic transport
bom03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bom00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102286064 (UPF3A)
   03015 mRNA surveillance pathway
    102286064 (UPF3A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bom03019]
    102286064 (UPF3A)
Messenger RNA biogenesis [BR:bom03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     102286064 (UPF3A)
   mRNA cycle factors
    P-body specific factors
     102286064 (UPF3A)
SSDB
Motif
Pfam: Smg4_UPF3
Other DBs
NCBI-GeneID: 102286064
NCBI-ProteinID: XP_005909457
Position
Un
AA seq 444 aa
VVIRRLPPSLTKEQLEQQLHPLPAHDYFEFFTADVSLYPHLYSRAYINFRNPDDILLFRD
RFDGYIFIDSKGLEYPAVVEFAPFQKIAKKKLKKKDAKTGSIEDDPEYKKFLETYCVEEE
KTSVSPETLLGDIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERRRRELEKKRL
REEEKRRRREEEKCRRKAAEKQKKTAEKEVRMKLLKKPEKGEEPSTEKQKERAEETDPGD
GKWEPCPSAVVLKPKPPEGSLEELRERSQNDSDKEQRDKERRSREKELEAQQCHLDDSRK
HRAHHELEKCSGRNGEELARGKGSAADGGRRGSQDRGCPVEAAERPGREKSEDRPAPRKE
RTGNKDRPGLQLYQPRARIRACDCDGRHPEEGRDGRRGEAEDSTVALAEKSEEAVWGDMH
VGDVGGGSPPQRSVGSRGRSFRKL
NT seq 1335 nt   +upstreamnt  +downstreamnt
gtggtcatccggcggcttccccccagcctcaccaaggagcagctggaacagcagctgcac
ccgctgcctgcacacgattatttcgagttctttactgctgatgtcagtctttatcctcat
ctctactcaagagcatacattaactttagaaatccagatgacatccttctttttagagat
cgttttgatggatatatcttcattgatagtaaagggctagaatatcctgcagtggtagaa
tttgctccattccagaagatagccaaaaagaagctaaagaaaaaagatgccaaaaccgga
agcattgaagatgacccagagtataagaaatttttagaaacttactgtgtggaggaggag
aaaactagtgtcagtcctgaaactcttctgggagacatagaggcaaagacacgagaactt
attgctagaagaaccacacctctcttggaatatattaagaacagaaaattagagaagcag
cgaattcgagaagaaaaacgagaggagcggaggaggagggagctggaaaagaagcgccta
cgggaagaagagaagcggaggcggcgggaggaggagaagtgcaggaggaaagcagcagaa
aaacagaagaaaacggcggagaaggaagtaaggatgaagcttctcaaaaaaccagaaaag
ggagaggagccgagcactgagaaacaaaaagaaagagcggaggagactgaccctggagac
gggaagtgggagccttgtcccagtgcggtggtcctaaagcccaagcccccagagggctcg
ctggaggagctccgggagaggtcacaaaatgacagtgataaagagcaaagggataaggag
agaagatcccgagaaaaagaacttgaagcacagcaatgccacttggatgacagcaggaaa
cacagagcccaccatgagctggaaaaatgttcgggaagaaatggagaagagctggcacgg
gggaaggggtcggccgcagacggagggagaagagggagccaggataggggctgccctgtg
gaagcagcagagaggccgggaagggagaagagtgaagaccggccggcacccagaaaggag
cgcacgggaaacaaggaccggccaggcttgcagctgtaccagcccagagctcgcatccga
gcctgtgactgtgatggaagacaccctgaggagggccgcgacgggaggaggggtgaggcg
gaagactcaacggtggctttagctgagaagagcgaagaggcggtgtggggcgacatgcat
gttggtgacgtgggtgggggctccccacctcaacgctctgtgggttcgagagggcgttcc
ttccggaagttataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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