KEGG   Cytobacillus oceanisediminis: A361_00695
Entry
A361_00695        CDS       T04330                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
bon  Cytobacillus oceanisediminis
Pathway
bon03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bon00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    A361_00695
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bon03021]
    A361_00695
   03400 DNA repair and recombination proteins [BR:bon03400]
    A361_00695
Enzymes [BR:bon01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     A361_00695
Transcription machinery [BR:bon03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     A361_00695
DNA repair and recombination proteins [BR:bon03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      A361_00695
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1
Other DBs
NCBI-ProteinID: AND37748
UniProt: A0A160M745
Position
130872..134426
AA seq 1184 aa
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFHDISPIEDFTG
NLSLEFIDYSLGEPKYSVEESKERDVTYSAPLRVKVRLVNKETGEVKDQDVFMGDFPLMT
ETGTFVINGAERVIVSQLVRSPSVYFSGKLDKNGKKGFTATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRALGFGSDQEIIDLIGDNEYIRNTLEKDNTESTEKALLEIYERL
RPGEPPTVENAKSLLVSRFFDPKRYDLANVGRYKINKKLHIKNRLFGQKLAETLVDPETG
EIIAEKGVTLDRRTLDRILPNLEKDIGFKTVSLLGGVVDDEVLLQSIKIYAPNEDGEKVI
NVIGNAYVEEAVKNISPSDIIASISYFFNLLHSVGDTDDIDHLGNRRLRSVGELLQNQFR
IGLSRMERVVRERMSIQDTNTITPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPLAELT
HKRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSFAKVNRFG
FIETPYRRIDPETGKVTSRIDYLTADEEDNYVVAQANALLGDDGSFLDEEVVARFKGENT
VVKRDRVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMQPEAPRVGTG
MEYVSGKDSGAAVICKHEGIVEHVEAREVWVRRIQNVDGQEVKGDLDKYRMLKFIRSNQG
TCYNQRPIVAVGNRVTKGEILADGPSMELGELALGRNVLVAFMTWDGYNYEDAIIMSERL
VKDDVYTSIHIEEYESESRDTKLGPEEITRDIPNVGEDALRNLDERGIIRTGAEVKDGDL
LVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVLDVKVFNREDGDEL
PPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISRILPEEDMPYLPDGTPVDIMLNPLG
VPSRMNIGQVLELHLGMAARALGIHVASPVFDGAREEDVWATIEEAGMARDAKTVLYDGR
SGEPFDNRVSVGVMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVW
ALEAYGAAYTLQEILTVKSDDVVGRVKTYESIVKGENVPEPGVPESFKVLIKELQSLGMD
VKILSGDEEEIEMRDLEDEDDVQQAESLTIAPETQNEEQVVTKE
NT seq 3555 nt   +upstreamnt  +downstreamnt
ttgacaggtcaactagttcagtatggacgacaccgccaacgtagaagttacgcacgaatc
agtgaagttttagaattaccaaatctaatcgaaatccaaacctcttcttatcaatggttt
cttgatgagggtttacgagaaatgttccatgatatttctccgattgaagactttactggt
aatttgtcgcttgaatttattgattacagccttggcgaaccaaaatattccgttgaggaa
tcgaaagaacgagatgttacatattctgcacctttacgtgtgaaagtgcgtcttgtaaac
aaagaaacaggcgaagttaaagaccaggatgtctttatgggtgacttcccgcttatgaca
gagacaggtacgttcgttattaacggagcggaacgtgtcattgtatcccagttagtacgt
tcaccgagcgtatatttcagtggaaagcttgataaaaacgggaaaaaaggctttacagca
accgtaatcccgaaccgcggcgcttggcttgagtatgaaacagatgccaaagacgtcgta
tacgtcagaatagatcgtactcggaaactgcccgttacggttcttttgcgtgcacttggg
ttcggctctgatcaagagatcatcgatttgattggagacaacgagtacattcgcaacact
cttgaaaaagataatactgaaagtacagagaaagcgctgcttgaaatttatgagcgcctt
cgtccgggcgaaccgccaacggttgaaaatgcgaaaagcttgcttgtctcaaggtttttc
gatccaaagcgctatgacctggcgaatgttggacgctataagatcaataagaagcttcat
atcaaaaatcgcctgttcggtcaaaaactggctgaaacgcttgtggatccagaaactggc
gaaatcattgcggaaaaaggcgttacgcttgaccgccgcactttagaccggatccttcct
aacctggagaaggatatcggctttaaaaccgtaagccttttaggcggagttgtagatgat
gaagtgctgcttcagtctattaagatttacgcgcctaatgaagatggcgaaaaagtcatc
aatgtaattggcaatgcttatgttgaagaagcagtgaaaaacatttcaccttctgacatc
attgcttcaatcagttatttctttaaccttctgcactctgtaggagatacagatgatatc
gaccatcttggaaacagacgtcttcgttcagtcggagaactattgcagaaccagttccgc
atcggtctttcccgtatggagcgtgtggtccgcgagagaatgtccatccaggatacaaat
accattacgcctcagcagctgattaatatccgtcctgttattgcgtcaattaaagagttc
tttggaagctcgcagttgtcccagttcatggaccagacaaatccgctcgctgaactgaca
cataaacgccgtctttctgcgttaggacctggtggtctgacacgtgaacgtgccggcttc
gaagtacgtgacgttcactactctcactatggccgtatgtgtccgattgaaacgccggag
ggaccaaacatcggtttgattaactccttatcttcatttgcgaaggtaaaccgtttcgga
tttatcgaaacaccgtatcgccgaattgaccctgagaccggaaaagttacatcccgcatc
gactatctgacagctgatgaagaggataactatgtagtggcccaggcgaatgcacttctt
ggtgacgatggctcattccttgacgaagaagtagttgcccgtttcaaaggtgaaaacaca
gttgtgaagcgagaccgtgttgactacatggatgtatcgcctaaacaggtagtttctgct
gcgacggcatgtatcccattcctggaaaacgatgactccaaccgtgccctgatgggagcg
aacatgcagcgtcaggctgtgcctttgatgcagccggaagcgccaagagttggtactggt
atggaatatgtatcaggtaaagactcaggtgctgcagtcatctgtaagcatgaggggatc
gttgagcacgtagaagctcgcgaagtttgggttcgccgcattcaaaacgtggatggccag
gaagttaaaggcgatcttgataaatacagaatgcttaaattcatccgttccaaccaggga
acttgctacaaccagcgcccaatcgttgctgtaggcaaccgtgtaactaaaggagaaatc
cttgctgacggaccttccatggaacttggtgaattagcgcttggacgcaacgttctcgtc
gcgtttatgacatgggatggatataactacgaggatgcgatcattatgagtgagcgcctc
gtaaaagatgatgtttatacatctatccatattgaagaatatgaatcagaatcacgcgat
acaaagcttggacctgaagagatcacaagagatatccctaacgttggggaagatgcactg
cgcaatctggacgaacgcggaattatccgcacaggtgcggaagtaaaagatggcgacctt
cttgttggtaaagtaactcctaaaggggtaacggaactaacagctgaagaacggctattg
cacgcaatctttggtgaaaaagctcgtgaagtccgcgatacttcccttcgtgtgccacac
ggcggcggcggtatcgtactcgatgttaaagtatttaacagagaagatggagatgagctt
cctccaggtgttaaccagcttgtgcgtgtatatatcgttcagaagcgtaaaatctctgaa
ggtgacaagatggccggacgccacggtaacaaaggtgttatctcccgtattttaccggaa
gaagacatgccttacctgccggatggcaccccagtagacatcatgttaaaccctctcggg
gttccatcgcgtatgaacatcggacaggtgcttgagcttcaccttggtatggctgccaga
gcattgggcattcacgtagcatctcctgtatttgatggtgcccgcgaggaagatgtatgg
gcaacgatcgaagaagcaggcatggcgcgtgatgctaagactgtcctttatgatggacgt
tcaggcgagccgtttgacaatcgcgtatcagtaggagtcatgtatatgatcaaactggcg
cacatggttgacgataagctccatgcccgttcaacaggaccttactctcttgttacgcag
cagccattgggcggtaaagctcagtttggcggacagcgtttcggtgagatggaggtttgg
gcacttgaagcatatggtgctgcctatacacttcaggaaatcttaacggttaagtccgat
gacgtcgttggacgtgttaagacttacgaatcaatcgtcaaaggcgagaatgttcctgaa
ccgggcgtaccggaatcattcaaggtactaatcaaagaacttcaaagtttaggtatggat
gttaagatcctttctggcgatgaagaagaaattgaaatgcgcgacctggaagatgaagat
gatgttcagcaggctgaatcattgacaatcgctccggaaacgcaaaatgaagaacaggta
gttacgaaagaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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