KEGG   Cytobacillus oceanisediminis: A361_09950
Entry
A361_09950        CDS       T04330                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
bon  Cytobacillus oceanisediminis
Pathway
bon03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bon00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A361_09950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bon03019]
    A361_09950
   03016 Transfer RNA biogenesis [BR:bon03016]
    A361_09950
Enzymes [BR:bon01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     A361_09950
Messenger RNA biogenesis [BR:bon03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     A361_09950
Transfer RNA biogenesis [BR:bon03016]
 Prokaryotic type
  tRNA degradation factors
   A361_09950
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 SPATA25 S1_2
Other DBs
NCBI-ProteinID: AND39439
UniProt: A0A160M9N6
Position
1958168..1960288
AA seq 706 aa
MGQDKHVYSLEWAGRKLTVEIGQLAKQANGAVLVRYGDTVVLSTATASKEPKNLDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAILASRLIDRPIRPLFADGFRNDVQVVSMVMSV
DQNCSSEMAAMFGSSLALSVSDIPFGGPIAGVSVGRIDGEFIINPSVDQAEKSDISLVVA
GTKDAINMVEAGADEVPEETMLEAIMFGHEEIKRLIAFQEEIASEIGKEKMEIVLYQVDQ
DLEAEVRGICEKDMIQAIQVQEKHAREAAIKAVKEQITAKYEGEEADDDKLKQIRQILDK
IVKAEVRRLITEDKVRPDGRGLDVIRPLSSEVGLLPRTHGSGLFTRGQTQALSICTLGAL
GDVQILDGLGIEEEKRFMHHYNFPNFSVGETGPIRGPGRREIGHGALGERALEPIIPSEK
DFPYTIRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGIAMGLIKSGEHYSILT
DIQGMEDHLGDMDFKVAGTSKGVTALQMDIKIEGLSREILEEALQQAKKGRMQILDSMLS
TIGQPRKELSEYAPKILMMSINPDKIRDVIGPSGKQINKIIEETGVKIDIEQDGTVFISS
VDEEMNQKAKKIIEDIVREVEVGQMYLGKVKRIEKFGAFVEIFSGKDGLVHISELAEERV
GKVEDVVSIGDELLVKVTEIDKQGRVNLSRKAVLREQREQKEKAQQ
NT seq 2121 nt   +upstreamnt  +downstreamnt
atgggacaagataaacatgtctacagccttgagtgggctgggcgcaaattgaccgttgag
attggccagcttgcaaaacaggctaacggtgcggttttagtgcgctatggcgatactgta
gtattaagtactgctacagcatcaaaagaaccgaaaaatctggatttctttccgctgaca
gttaactatgaagaacgtttatatgctgttggtaagattcccggcgggtttattaagaga
gagggacgtccaagtgaaaaagcgattttggccagccgcttgattgacaggccaatccgt
ccattattcgctgacggtttcagaaatgatgtacaggttgtaagcatggtgatgagtgtg
gatcaaaactgctcatctgaaatggctgcaatgtttgggtcatcattagctctttctgtg
tcggatattccattcggcggaccgattgcaggagtcagcgtagggcgcatcgatggagaa
ttcatcattaatccatctgtggatcaggctgaaaagagcgatatcagcctggttgtagcc
ggtacaaaggatgcaattaacatggtagaagcaggtgcagatgaagtgcctgaagaaaca
atgcttgaggcgattatgtttggccatgaggaaatcaaacgccttattgctttccaggaa
gaaattgcgtctgaaatcggcaaagagaaaatggaaattgttctataccaggttgatcag
gaccttgaggctgaagtacgcggcatctgtgagaaagatatgattcaagctatccaggtg
caggagaagcatgcccgagaagctgccattaaagcagttaaagaacaaattacagctaaa
tatgaaggtgaagaagcagacgatgacaagctgaagcaaatcaggcagattcttgataaa
attgttaaagctgaagtgaggcgtctaatcacagaagataaagttcgcccggatggacgc
ggattggatgttatccgcccgctatcatcagaggtaggccttctgccgcgcacacatggt
tccggtttgtttacacgcggacaaactcaggctctgagcatttgtacattaggagctctt
ggagatgtacagattcttgatggtctgggcattgaagaagaaaagagattcatgcaccac
tacaatttccctaacttcagtgtaggtgaaactgggccaattagagggccaggacgccgc
gaaatcggacatggagctcttggagaacgcgctcttgagccgatcattccatctgaaaag
gatttcccttatacaatccgtctagtatcagaggtattagagtccaatggttcaacatca
caggcaagtatttgtgcaagtacattggcaatgatggatgcaggtgtgcctattaaagcg
ccagttgccggtatagcaatgggtcttattaaatcaggcgagcattattcaatcctgaca
gacattcagggtatggaagaccacctgggtgacatggacttcaaagtggcgggtacatcc
aagggtgttactgccctgcaaatggatattaaaattgaaggtttgtctcgtgagattctt
gaggaagcattgcagcaggcgaaaaaaggccgcatgcagattcttgattccatgctgagc
actattgggcagccaagaaaagagctgtctgaatatgctcctaagattctgatgatgtca
attaaccctgataaaatccgtgatgtcattgggccaagcggaaagcagatcaataagatc
attgaagaaacaggcgttaagattgatatcgaacaagatggcacagtattcatctcatct
gtagatgaagagatgaatcaaaaagcgaagaagattattgaagatatcgtacgtgaagtg
gaagttggacaaatgtatcttggcaaggtgaaacgaattgaaaaattcggtgcatttgtt
gaaatcttctccggtaaagatggtttggttcacatttctgaacttgctgaagagcgtgta
ggaaaagtggaagatgttgtatccatcggtgacgaacttctcgtaaaagttactgaaatc
gataagcaaggccgcgtaaacctttcccgcaaagccgtattgcgtgaacagcgtgagcaa
aaggaaaaagcacagcaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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