KEGG   Cytobacillus oceanisediminis: A361_11920
Entry
A361_11920        CDS       T04330                                 
Name
(GenBank) ATP-dependent helicase
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
bon  Cytobacillus oceanisediminis
Pathway
bon03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bon00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    A361_11920
  09124 Replication and repair
   03420 Nucleotide excision repair
    A361_11920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bon03021]
    A361_11920
   03400 DNA repair and recombination proteins [BR:bon03400]
    A361_11920
Enzymes [BR:bon01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     A361_11920
Transcription machinery [BR:bon03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     A361_11920
DNA repair and recombination proteins [BR:bon03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     A361_11920
SSDB
Motif
Pfam: Helicase_C_2 DEAD_2 DEAD ResIII PDDEXK_1 Helicase_C PhoH COG6_N
Other DBs
NCBI-ProteinID: AND39817
UniProt: A0A160MAK5
Position
2338699..2340990
AA seq 763 aa
MDNKIKISVRSLVEYVYKSGSIETGFRSAVPLSEGTRIHQRIQKLYGEEDQKEVYLHTVL
TFNHLDFQLEGRCDGLFIRNEEHIIDEIKSVSLPLSEIDEFAYPVHWAQAKCYAFMYAKD
HNLPDMTVQLTYVQSKTDEVKRFQQSYSLRELEEFILYLLESYFPYADWKIQHQQALTKS
IQELAFPFPAYRNGQRRFAGAVYKTIAEGKNLFANAPTGIGKTISTLFPALKAIGEGHIQ
RIIYATAKTITRQAAEGAIAMMGDDGLNLKSVTITAKDKICFKEETNCQKDNCEFANGYY
DRINQAVLDLLKNENMISRTAIEQYAKKHKVCPFEFSLDAAYAADAIIGDYNYIFDPRVS
LKRLLEEEKKKTALLIDEAHNLVDRGREMYSSSLEKSAFLQLSRSFKGKDEGIQKSAKQV
NGIFIALKKKCGENQEIAEKNPPEELFEILEEFVQYSENYLGQNRNNTEEELLEVFFAAQ
NFIRIGKLYDDRFVTYIQKERNDLIIKLFCLDPSSLLHKARKGYKSAIFFSATLMPLNYY
LDMLGFQEEDFIVSVPSPFSKDQAKVYIQPLSTRYRDREGSIEPIVRTIKSMLKGQKGNY
LIFFPSYQYMEIVYGRFLDEEMPVHAIIQKTGMDEREREEFLDAFQPNASGTLLGFAVMG
GIFSEGIDLQGDRLNGVFVVGVGLPQIGFERDMMKAYFQQQGKNGYDYAYTYPGMNKVLQ
AGGRLIRSENDTGMIVLMDDRYLQAKYQTLLPDEWKDSILLRS
NT seq 2292 nt   +upstreamnt  +downstreamnt
atggataataagataaaaatatcggttagatcgttagttgaatatgtttataaaagcggc
agcattgaaacaggcttccgttctgcagtgccgctttcagaaggaacaaggattcatcaa
agaatccaaaaactttatggggaagaagaccaaaaagaagtgtatctgcacacagtctta
accttcaatcacctagactttcagcttgagggcaggtgtgacgggcttttcatcagaaat
gaagaacacattatcgatgaaattaagtctgtttccctcccgctatctgaaatagatgaa
tttgcatatccagtccattgggctcaggctaaatgctatgctttcatgtatgcaaaagat
cataatcttccagacatgacagttcaattaacctatgtacaatctaaaacagatgaagtg
aaaagatttcagcaaagctattctttacgtgaacttgaagaatttatactttaccttctg
gaatcctattttccatacgccgactggaagattcagcatcaacaggcattaacaaagagc
atacaagaattggcttttccttttcctgcctaccgaaatggccagagaagatttgccggg
gcagtatacaaaaccattgcagaggggaaaaacttatttgccaacgcacctacaggcatc
ggcaaaacaatttccactctttttccagcattaaaagccattggggaaggccatattcag
aggatcatttatgccacagccaaaaccattacccgtcaggctgctgaaggggccatagcc
atgatgggggatgatggattgaatcttaaatcggtcacaatcacagctaaagacaaaatt
tgctttaaggaagaaaccaattgccaaaaagacaactgtgagtttgccaatggatattac
gaccggatcaaccaggccgtacttgacctcctgaagaatgagaacatgataagcagaacg
gcaattgaacaatatgctaagaagcataaagtctgcccttttgaattttcattggatgcc
gcatatgccgctgacgccattattggtgattataactatattttcgatccgagggtctca
cttaagcgattactggaagaggagaaaaagaaaacggctctattgatcgatgaagctcat
aacctggtggaccgcggaagggaaatgtattcaagttccctggagaaatcagcctttctt
cagttgagcagaagctttaaggggaaggatgaagggattcaaaaaagcgcaaaacaggtt
aatggaatttttattgcattaaaaaagaaatgtggtgaaaatcaggaaatcgcagaaaaa
aatcccccagaagaactttttgagattcttgaagaatttgttcaatactccgaaaactac
ctggggcaaaacagaaacaatacggaagaagaattgctggaagtattctttgctgcccag
aatttcatcagaataggaaaactgtatgatgacaggtttgtaacgtatattcaaaaggag
aggaatgacctgatcatcaagttattttgcctggatccttcgagtcttctgcacaaggcc
agaaaaggatataaatcggctatctttttttccgctaccttaatgcctcttaactattat
ctggacatgcttggctttcaagaggaagatttcattgtatccgttccttcccctttctcc
aaagatcaggctaaggtctacatacagccgctttccaccagatatcgtgaccgggaagga
tctatcgaaccgattgtcagaacaatcaagagcatgctaaagggacagaaggggaattac
ttaatcttctttccatcctatcaatatatggaaattgtttatggaaggttcctcgatgag
gaaatgccagtacatgcaattattcaaaagacaggaatggatgaaagagaaagggaggag
tttctggatgcatttcagccaaatgcttctggtactctgttggggttcgccgtcatgggc
gggattttttcagaaggaattgatttgcagggagataggctgaatggtgtatttgtggtt
ggtgtgggtcttccccagatcgggtttgaacgtgatatgatgaaagcttatttccagcag
caagggaaaaacggctatgattatgcctatacttatcctggaatgaacaaagttcttcag
gcagggggcaggcttattcgttctgaaaacgatacagggatgattgtcttaatggatgac
aggtatttacaggcaaagtatcagaccctgctgcctgatgaatggaaggattctattttg
ttaagaagttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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