KEGG   Rhodophyticola sp. CCM32: E2K80_17830
Entry
E2K80_17830       CDS       T05925                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
boo  Rhodophyticola sp. CCM32
Pathway
boo03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:boo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    E2K80_17830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:boo03021]
    E2K80_17830
   03400 DNA repair and recombination proteins [BR:boo03400]
    E2K80_17830
Enzymes [BR:boo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     E2K80_17830
Transcription machinery [BR:boo03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     E2K80_17830
DNA repair and recombination proteins [BR:boo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      E2K80_17830
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L RNA_pol_L_2 Glyco_hydro_65C
Other DBs
NCBI-ProteinID: QBY02373
UniProt: A0A4V1BRE3
Position
3633346..3634362
AA seq 338 aa
MIHKNWQELIKPTQLVVNPGNEPARQATVVAEPLERGFGLTLGNALRRVLMSSLQGASIT
SVQIDNVLHEFSSIAGVREDVTDVVLNLKGVAIRMETDGPKRVSISAKGPKVVTAGDISE
SAGIEVLNKEHVICHLDEGADLYVELTISTGKGYVAADKNRPEDAPIGLIPIDAIYSPVK
KVSYDVQPTREGQVLDYDKLTLKLETDGSVTPDDAVAYAARIIQDQLSIFVNFDEPESAS
RQDDEDDLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDIIDWPPDNIEDLAKKYEDNF
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgatccataaaaactggcaagagcttatcaagcccacgcaactggtcgtgaacccgggc
aatgaacccgcacgtcaggcaaccgttgtggccgaaccactggagcggggctttggcctg
acgcttggcaacgccttgcgccgcgtgctgatgagctcgctgcagggggcgtcgatcacc
agcgtgcagatcgacaatgtgctgcatgagttttcctcgatcgccggtgtgcgggaagac
gtcaccgatgtggttctgaacctcaagggcgtggcgatccgcatggaaaccgacggcccg
aaacgcgtgtcgatctcggccaagggcccgaaggttgtgaccgcgggcgatatctcggaa
tccgcaggcatcgaagtgctcaacaaagagcatgtgatctgccatctggatgaaggcgcg
gacctctatgtggaactgaccatcagcaccggcaaaggctatgtcgcggcagataagaac
cgccccgaggatgcaccgatcggcctgatcccgattgatgcgatctattcgccggtcaag
aaggtcagctatgacgtgcagccgacccgtgagggccaggtgctggattacgacaagctg
accctgaagctggaaaccgacggatcggttacgcctgacgatgcggtggcctatgccgcg
cggatcatccaggaccagttgtcgatcttcgtgaatttcgacgagccggaaagcgccagc
cgtcaggatgatgaggatgatctggaattcaacccgctgctgctgaagaaagtggatgag
ctggaactgtcggtgcgttcggcgaactgcctgaagaacgacaatatcgtttatatcggg
gatctgatccagaaaaccgaggccgagatgctgcggaccccgaattttggccgcaaatcc
ctgaacgagatcaaggaagttctgtcaggcatggggctgcatcttggtatggatatcatc
gactggccgcccgacaatatcgaagatctggccaagaaatacgaagacaatttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system