KEGG   Bipolaris oryzae: COCMIDRAFT_6330
Entry
COCMIDRAFT_6330   CDS       T03125                                 
Name
(RefSeq) hypothetical protein
  KO
K14312  nuclear pore complex protein Nup155
Organism
bor  Bipolaris oryzae
Pathway
bor03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:bor00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    COCMIDRAFT_6330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bor03019]
    COCMIDRAFT_6330
Messenger RNA biogenesis [BR:bor03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     COCMIDRAFT_6330
SSDB
Motif
Pfam: Nucleoporin_N Nucleoporin_C Tis11B_N
Other DBs
NCBI-GeneID: 19124926
NCBI-ProteinID: XP_007689120
JGI: Cocmi1_6330
UniProt: W6Z3N9
Position
Unknown
AA seq 1364 aa
MAFQMAPATPQRPTPGAFVNTPAPNRPGFARRGSMSQPQSQQQQQQQVLPAPPAESPIDR
ASRTINSMLDRDNRFPALEAYIGQGISGEYEIPSGPAWAPFQKLRSYKLPEAVFEQVDHT
QMSTSMGLFAEINHAWVVVDNQVYLWDYTHPNPELVGFEEQPSNITCVKLVKPRAGVFVP
SIEYLLVVATVSDIFLIAVECQRGSEGVHGITMYRTGLSTSVRKINVTAIAGSDTTGRIF
FGDGQTEDVYELNYQQEDKWFSSKCSKTNHVTTSIGLPALPFYGTTRQAGIQQMAIDDTR
NVLYTLSTNGTIKVYYMRAPNVLESALTRTRTQIETMCGHIVRPTGVLDKMQIVSLSPIS
STEADNLSLIAITSSGCRLYLSTTSGGQWSANNTSAPSSMQLRHIRFPPNDGQPSAQSNS
TQVQPYQGGTTVGFESRWLRETKLGIRYPPGAFFSFVLRSPNDPNHHMFVSAPHSGLLGQ
RESSEPPRYTETGLFTELVGRVQDIGLASEPFSARNEPLGFGNELATQFDKPLCEYAIIT
SNGIETVRRRRLVDIFASIVKSGGPEGAEADIRKLAKQYGLAETSATALAVACGQGSDVG
PDSRIAKVTDPEVLDFARRVFIEFGGKAHLTESATVEGLSVENVRASPRHDGIAMYVARI
VRSIWNSPIITETVTPTGPALTSTHKITKLQEVQRCLAQLQEFLESNKSFIEGLAGPEAL
GRATSRQEEVELQGENRALTSLLQMVNNIVEGISFVLVLFEERLEDILALLADPQLQARV
RQLTFQGLFSVKEGREIARELVKAIVNRNITKGSNVESVAEALRRKCGSFCSSDDVVIFK
AQESLKKAADMGANAERGRILLNDSLRLFEQVAKSLSYENLAATVDQYIQLEFYAGAIRL
ALKVAQEWDRGNKALSWVRDSRDHVSDASDPRRHFYEQRASCYTLVCNVIEAVDHAFNTQ
GPVPDGVISQVTRRKHEAYEQINNSDDEVFQNYLYDWYMQNGWAERLLEINSPFVVEYLR
QSSDTNLAHADLLWRYYAHYNDYLSAAETQFQLAKSTLPLTLEKRIEYLSRAKANASTRM
TGFSETGVRNRQTRQELLRNISDHLDIANIQDDVLQRIKGDERLVGKRREDVIEHLNGQI
HPLDELYHDYADQAGYYDICLLIYHAADYRSVPDIRSTWTNLIDQTHRNAVADRQAAPWE
VVALKVQDLGHRTNLNDNVFPVNIVLQLVLQYDLEFYVHDANAPNAQNLALNANLTWPID
VFLKLNAPFESLVATLEALWYAQEPPFAGRNRKLLVKWIIYLVEQWATVSRRTGALFGGP
ENAIGLADVMRIILGSDVLGRDMDDQSWIQRARDINAVVEEAAR
NT seq 4095 nt   +upstreamnt  +downstreamnt
atggcttttcaaatggcgcccgcgacgccgcagcgacctacccccggcgcttttgtcaac
acgccggctccaaaccgacctggctttgcacggagaggctccatgtcgcaaccacagtcg
cagcaacagcagcaacagcaagtgctgcctgcacccccagcagagagtcccatcgatcgc
gcatcgcggactataaacagcatgctggacagagacaacagattcccagccctcgaggca
tacatcggacagggtatctctggtgaatatgagataccgagtggtccggcatgggcgcct
tttcaaaaactgcggtcgtataagctccccgaggccgtcttcgagcaggtggaccatacg
caaatgtcgacaagcatgggcctgttcgccgagatcaaccacgcctgggttgtagttgac
aaccaggtctatctttgggactacacgcacccgaaccccgagctcgttggctttgaagag
caacccagcaacattacctgtgtgaagctggtcaagccgcgtgccggtgtcttcgtgccc
tccatcgagtacctccttgtcgtcgcaaccgtgtcggacattttcctgattgctgtagag
tgtcaacgggggtccgagggagtgcacggtatcacaatgtaccggacaggattgtccacg
tcagtcaggaagatcaatgtgaccgcaatcgctggttcagatacgacagggcgcatcttc
tttggtgatggacaaacagaggatgtatacgagctcaactaccaacaagaggacaagtgg
ttctccagcaaatgcagcaagactaaccatgttaccacttctatcggcctaccggcactg
cccttctacgggacgacgcgacaagctggtatccagcagatggccattgacgacacccgg
aacgtcctctacacgctctccaccaacggaaccatcaaggtctactacatgcgtgcgcca
aacgttttggagagcgcattgactcgaacacgcacacagattgagaccatgtgtgggcac
attgtacgaccgacgggcgtgctggacaagatgcagattgtcagtctgagtcccatttct
agcacagaggcggacaatctctctctaatagcaatcacttcgtcaggctgtagattgtac
ctgagcacaacgtctggaggtcaatggagcgcaaacaacacaagtgcgccaagtagcatg
caattacgacacattcggttcccgccaaacgacggccagccctcggcccagagcaattcg
acccaagtacagccataccaaggaggcacaacagtcggttttgaatcgaggtggttgaga
gaaactaaacttggaattagataccctcctggtgctttcttctctttcgtccttaggtcg
ccaaacgacccgaatcatcacatgtttgtttccgcgccccactccggactattgggtcaa
agggaaagctcagaacctccgcgatacaccgaaactggcctgttcacagaactcgtagga
agagtgcaagacatcggcctggcatctgaaccattctcagcaaggaacgaacctctcggc
tttggcaatgagctcgccacccaatttgacaagccgctgtgcgaatacgccatcatcaca
tcgaacggcatcgaaactgttcgacgcagaagactggtggatatttttgcttccattgta
aagagtggaggccccgagggtgccgaagctgatattcgtaagctcgcaaagcaatatggt
ctggctgaaacttcagctacagctttggctgttgcttgcggtcaagggtcagatgttgga
ccagattcaaggattgccaaagtcacggatcccgaagtgcttgattttgctcgtagggtg
ttcattgagtttggcggcaaggcgcatcttacagagagtgctactgtagaaggcctgagc
gtagagaacgtccgcgcatcaccacgacacgatggtatcgccatgtatgttgcgcgcatt
gttcgatcaatctggaacagtcccatcatcacagagaccgtcactccaactgggccggct
cttacctcgactcacaagatcaccaagttgcaggaggtacagcgttgtttggcccaactt
caggaattcttggaatctaacaagtcattcattgaaggactggccggcccagaggctttg
gggcgtgcaacatcgcggcaagaagaggttgagctccagggcgagaacagagcactcact
agcttgttgcaaatggtcaacaacattgtcgaaggcatctcttttgttctagtgctcttc
gaggagcgtttggaggacattctggccctgctagcagacccccagctccaagcaagagtt
cgtcaactcaccttccagggtctcttctccgtcaaagagggcagggaaattgccagggag
ttggtcaaggctattgttaaccgcaacattactaagggttcaaatgtcgagtcagttgct
gaggccctccggaggaagtgtggcagcttttgtagttcggatgatgtggtcatcttcaag
gctcaggagagcttgaagaaggcagctgacatgggcgcaaatgctgagcgtggacgtatc
ttgctcaatgatagcttgagattgttcgaacaagtggcgaagagcctgagctatgagaat
ttggctgccactgttgatcagtacatccagcttgagttctatgctggtgccatcagactt
gccctcaaagtcgctcaagagtgggaccgaggtaacaaagccctatcttgggtgcgggac
tcccgtgaccatgtcagcgatgcaagcgatccacgacgtcacttttatgaacagcgcgct
tcttgttacaccctcgtttgcaatgtgatcgaggctgtcgaccatgccttcaacacccaa
gggcctgtgcctgatggtgttatttcccaggtcactcgtcgcaaacatgaagcgtacgag
caaatcaacaactcagacgacgaagtcttccaaaattacctgtacgactggtacatgcag
aacggatgggccgagcgattgctggagatcaactctccgttcgtagtcgaatatctgcgc
cagagctctgacacgaacctagctcacgcggatctgctgtggcgctactacgctcattac
aacgactacctaagtgcggcggagacacagttccagcttgcgaagagtaccctacctcta
acactagaaaagaggatagaatacctgtcgcgggccaaggcgaatgcttcaacgcgtatg
actgggttttcggaaacaggagtacgcaatcgccagaccaggcaagaattgctgcgaaac
attagcgatcatcttgatattgccaacatccaagacgatgtgttgcagcgtatcaagggc
gatgagcgacttgttggaaagcggagggaagacgtcattgagcatcttaatggccagatc
catcctcttgacgagctctaccatgattacgccgaccaagcaggttactacgatatctgc
ctcctcatttaccatgccgccgattaccgtagcgtaccggacattcgctcaacgtggacc
aacctgattgatcaaacccaccggaacgctgttgccgaccgccaggccgcgccctgggag
gttgtcgcactgaaagtccaggatcttggccaccgcaccaacctcaacgacaacgtgttc
cctgtgaatattgttttgcagctagtcctgcagtatgacttggagttctatgtccatgac
gccaacgcgcccaacgctcagaacctggcactgaatgctaaccttacgtggccaattgac
gttttcctcaagctgaacgcaccgtttgagagcctggtcgctacgctcgaggcactatgg
tacgcgcaggaaccgccattcgcaggccgcaaccgcaaattgctcgtcaagtggatcatt
tacctcgtcgagcagtgggccaccgtcagccggcgaacaggcgcgctattcggtggacct
gagaacgcaattggattggccgatgttatgcgcatcatcctgggcagcgatgttcttgga
cgagatatggatgatcagtcatggattcagagggcgcgcgacatcaacgctgttgtcgag
gaagctgctcgctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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