KEGG   Bosea sp. RAC05: BSY19_2369
Entry
BSY19_2369        CDS       T04462                                 
Symbol
rnr
Name
(GenBank) ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
bos  Bosea sp. RAC05
Pathway
bos03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bos00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BSY19_2369 (rnr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bos03019]
    BSY19_2369 (rnr)
   03016 Transfer RNA biogenesis [BR:bos03016]
    BSY19_2369 (rnr)
Enzymes [BR:bos01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     BSY19_2369 (rnr)
Messenger RNA biogenesis [BR:bos03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BSY19_2369 (rnr)
Transfer RNA biogenesis [BR:bos03016]
 Prokaryotic type
  tRNA degradation factors
   BSY19_2369 (rnr)
SSDB
Motif
Pfam: RNB CSD2 S1 OB_RNB RNase_II_C_S1
Other DBs
NCBI-ProteinID: AOG04066
UniProt: A0A1B3NFD8
Position
complement(2493096..2495438)
AA seq 780 aa
MSAPEPSREAILDFIDAEREAGREVGRREIAKAFGLSGGGKIWLKRLLKELEEEGETGGD
GVDRPVHPRGALPPVLLCEIKGKDRDGDAYGVPLEWNEAEQGVAPRILIERPREFRAKRH
AAPAPAFGDQVLLKLTRLKGVEGYAYSGRVLKVMGKGKAQVLGIFRAMPDGSGRLIPIDK
KAQGREALIPKGQTGDAEDGDLVSVALRSESRFGPPEAQVKERLGSLKSERAVSLIAIHA
HGIPNVFQPATIAESEAVRPAGTAGREDWRDLALITIDPADAKDHDDAVHAAPDADPDNP
GGHVVTVAIADVAAYVRPGSALDREALERGNSVYFPDRVVPMLPERISNDLCSLREGEDR
PALAVRLVLKADGSKKSHSFHRILMRSAAKLSYQQAQAAIDGQGDEKGSAVRDTILMPLW
AAYGLAARARDARQPLDLDLPERKLILKPDGSVDRVVVPERLAAHKLIEEFMILANVAAA
ETLEKAGSLLVYRCHDEPSLEKIRALGEVLASIGIKLPKEGVLRPALFNRILGMIKGSEN
EIFINEVVLRSQAQAEYVAENYGHFGLNLRRYAHFTSPIRRYADLVVHRALIAAQRFGED
GLPKGTTLETLREVSTRISAAERRAMAAERETVDRLIAHFLADQIGASFDGRIGGVNKAG
LFVKLDGTGADGFIPASTLGADYYRYDEAAHALIGERTGESFRLGDRVHVKLVEAAPVAG
ALRFELLSAGRAATAGGLGGRGPAPRRGKGGAFGGPPGGRSGPGRFAKGKAGKPKSGKRR
NT seq 2343 nt   +upstreamnt  +downstreamnt
ttgtccgcgcctgaacccagccgcgaggcgatcctcgacttcatcgacgcagagcgcgaa
gccgggcgcgaggtcggccgccgcgagatcgccaaggccttcgggctctcgggcggcggc
aagatctggctgaagcgcctgctcaaggagctcgaggaagagggcgagaccggcggcgac
ggcgtcgaccggccggtgcatccgcgtggcgccctgcccccggtgctgctctgcgagatc
aagggcaaggatcgcgacggcgacgcctatggcgtgcctttggaatggaacgaggccgag
cagggtgtcgcgccgcgcatcctgatcgagcggccgcgtgagttccgggccaagcgccat
gccgcgccggcgccggccttcggcgaccaggtgctgctgaagctcacgcggctgaagggc
gtcgagggctatgcctattccggccgcgtgctgaaggtgatgggcaagggcaaggcgcag
gtgctcggcatcttccgcgccatgccggacggttcgggccgcctgatcccgatcgacaag
aaggcgcagggccgcgaggcgctgatcccgaagggccagaccggcgacgccgaggatggc
gacctcgtttccgtggcgctgcgcagcgagagccgcttcggtccgccggaggcacaggtc
aaagagcggctcggttcgctgaaatccgagcgcgcggtgagcctgatcgcgattcacgcc
catggcattcccaacgtcttccagcccgccacgatcgcggaatcggaggccgtgcggccg
gccgggacggcggggcgcgaggactggcgcgacctggccctgatcacgatcgaccccgcc
gacgccaaggaccatgacgacgccgtccatgccgcgcccgacgccgatcccgacaatccc
ggcggccatgtcgtcaccgtcgccatcgccgatgtcgcggcctatgtgcggccgggctcg
gcgctcgaccgcgaggcgctggagcgcggcaactcggtctatttccccgaccgcgtcgtg
ccgatgctgcccgagcggatctcgaacgacctctgctcgctgcgcgagggcgaggaccgg
ccggcgctggccgtgcggctcgtgctcaaggccgacggctcgaagaagagccattccttc
caccgcatcctgatgcgctcggcggccaagctctcctaccagcaggcccaggccgccatc
gacggacagggcgacgagaagggctcggccgtccgcgacacgatcctgatgccgctctgg
gcggcctacggcttggcggcccgcgcccgggacgcgcgccagccgctggatctcgatctg
cccgagcgcaagctgatcctgaaacccgacggctcggttgaccgcgtcgtcgtgccggag
cggctggcggcgcacaagctgatcgaggagttcatgatcctcgccaatgtcgcggcggcg
gagacgctggagaaggccgggagcctgctggtctatcgctgccatgacgagccctcgctc
gagaagatccgggcgctcggcgaagtcctggcctcgatcggcatcaagctgccgaaggag
ggcgtgctgcgcccggcgctgttcaaccgcatcctcggcatgatcaagggctcggagaac
gagatcttcatcaacgaggtcgtgctgcgcagccaggcccaggcggagtatgtcgccgag
aattacgggcatttcggcctcaacctgcgccgctacgcccatttcacctcgccgatccgg
cgctatgccgacctcgtcgtccaccgcgccctgatcgcggcccagcgcttcggcgaggac
ggcctgccgaagggcacgacgctggagacgctgcgcgaggtctcgacgcggatctcggcc
gccgagcggcgcgccatggcggccgagcgcgagacggtcgaccggctgatcgcacatttc
ctggccgaccagatcggcgcctccttcgacgggcgcatcggcggcgtcaacaaggcgggg
ctcttcgtcaagctcgacggcaccggcgccgacggcttcattcccgcctcgacgctcggc
gccgactactaccgctatgacgaggcggcgcatgcgctgatcggcgagcgcacgggcgaa
agcttccgtctcggcgaccgcgtccatgtgaagctggtcgaggcggcacccgtcgcgggt
gcgctgcgcttcgagctgctttcggccggccgggcggcaacggcgggcggcctgggcgga
cgcggtcccgcgccgcgccgcggcaagggcggcgccttcggcggtccgcccggcggccgc
agcggcccggggcgcttcgccaagggcaaggcgggcaaacccaaatccggaaagagacgg
tga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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