KEGG   Bradyrhizobium ottawaense: CIT37_12070
Entry
CIT37_12070       CDS       T05524                                 
Name
(GenBank) RNA pseudouridine synthase
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
bot  Bradyrhizobium ottawaense
Brite
KEGG Orthology (KO) [BR:bot00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bot03009]
    CIT37_12070
   03016 Transfer RNA biogenesis [BR:bot03016]
    CIT37_12070
Enzymes [BR:bot01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     CIT37_12070
    5.4.99.29  23S rRNA pseudouridine746 synthase
     CIT37_12070
Ribosome biogenesis [BR:bot03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    CIT37_12070
Transfer RNA biogenesis [BR:bot03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    CIT37_12070
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AWL98020
UniProt: A0A2U8PK39
Position
complement(408549..409250)
AA seq 233 aa
MLDVPQLTADEILARVLHRDGLMLIIDKPAGLPVHRGPKGGANLEASFDALCFGLPRPPV
LAHRLDKDTSGCLVLGRHRKATASLGLLFKHGKIGKTYWTVVEGGPAEDEGTIDMPLGRL
NAERGWWQKPDPEGQKAITNWKVMGRGDGFTWLAMEPVTGRTHQLRVHSAATGWPIFGDN
IYGNGPRFGEPKLHLHSREIVVPISRNKEPVRVVAPAPPHMHEKLRACGWNGE
NT seq 702 nt   +upstreamnt  +downstreamnt
ttgctcgatgttccccaattgacggccgatgaaattctggcccgcgtgctccatcgcgac
gggctgatgctgatcatcgacaagccggccggcctgccggtgcatcgcggtcccaagggc
ggcgccaatctggaggcctcgttcgacgcgctctgcttcggcctgccgcggccgccggtg
ctcgctcaccggctggacaaggacacctccggctgcctcgtgctcggccgccaccgcaag
gcaacggcctcgctcggcctcctcttcaagcatggcaagatcggcaagacctactggacc
gtggtcgagggcggccccgccgaggacgagggcaccatcgacatgccgctcggccggctc
aacgccgaacggggctggtggcagaagcctgatcctgagggacagaaggcgatcacgaac
tggaaagtaatgggccggggtgacggtttcacctggctggccatggaaccggtgaccggg
cggacccatcaattgcgggtgcattcggccgcgaccggctggccgatcttcggcgataac
atttacggcaacggcccgcgtttcggcgagccaaagctgcacctgcattcccgcgagatc
gtggtgccgatctcccggaacaaggagcccgtccgcgtcgtggcgccggccccgccccac
atgcacgaaaagctccgcgcctgcggctggaacggggaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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