KEGG   Bradyrhizobium ottawaense: CIT37_33350
Entry
CIT37_33350       CDS       T05524                                 
Symbol
rnd
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
bot  Bradyrhizobium ottawaense
Brite
KEGG Orthology (KO) [BR:bot00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bot03016]
    CIT37_33350 (rnd)
Enzymes [BR:bot01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     CIT37_33350 (rnd)
Transfer RNA biogenesis [BR:bot03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    CIT37_33350 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC
Other DBs
NCBI-ProteinID: AWL96470
UniProt: A0A2U8PFS4
Position
4759780..4760928
AA seq 382 aa
MDLITTTADLAAACSRLAKHPVITVDTEFLRETTYYPLLCVVQMASAEEAVVVDTLAEGI
DLKPFFELMANEAVLKVFHAARQDIEIIWHQANIIPHPVFDTQVAAMVLGYGDSIAYDAL
VEKVTGHRPDKTHRFTDWSRRPLTKEQMHYAVSDVTHLRDVFAALDADLKKRRRSEWVSI
EMEVLTSPRTYDFHPERAWERLKTRVRKPKDLAVLMEVAAWREQEAQSRDVPRGRVLRDE
AISDIATHAPNTLEKLAHLRSVPKGFEKSKWGADIVAAVERGLARDFSTLPKLEKPRNNN
NGAAIVELLKVLLRMTAERHAVASKVIATVDDLEEIAADDEADVPALRGWRRELFGDAAL
KLKRGELALAIEKGRVIGVQRA
NT seq 1149 nt   +upstreamnt  +downstreamnt
atggatttgattaccaccaccgctgacctcgcggctgcctgcagccggctggccaagcac
cccgtcattaccgtcgataccgagttcctgcgcgagaccacctactacccgctgctatgc
gtggtgcagatggccagcgccgaggaagccgtcgtcgtcgataccctggccgaggggatc
gacctcaagccgttcttcgagctgatggccaacgaggccgtgctgaaggtcttccacgcc
gcccgtcaggacatcgagatcatctggcaccaggccaacatcatcccgcatccggtgttc
gacacccaggttgccgcgatggtgctggggtacggcgacagcatcgcctacgacgcgctg
gtcgagaaagtcaccggccaccgccccgacaagacccaccgcttcaccgactggtcgcgc
cggccgctgaccaaggagcagatgcattacgccgtgtccgacgtcacgcatttgcgcgac
gtgttcgcagcgctcgatgccgacctcaagaagcgccgccgcagcgaatgggtctccatc
gagatggaggtcctgacctcgccccggacctacgacttccaccccgagcgcgcctgggag
cggctgaagacgcgcgtgcgcaagccgaaggatctcgcggtcctgatggaggtcgccgcc
tggcgcgagcaggaagcgcagagccgcgacgtgccgcgcggccgcgtgctgcgcgacgag
gccatcagcgatatcgcgacccacgcgccgaacacgctggagaagctcgcccatctgcgc
tcggtgccgaagggttttgagaaatccaaatggggcgcggacatcgtcgccgcggtcgag
cgcgggctggcacgggatttttcgacgttgccgaagctggagaagccgcgcaacaacaac
aatggcgccgccatcgtcgagctcttgaaggtgctgctgcgcatgaccgcggagcggcat
gcggtcgccagcaaggtgatcgccaccgtcgacgatctcgaagagatcgcagccgacgac
gaagccgacgtccccgccttgcgcggctggcgccgcgagctgttcggcgatgccgccttg
aagctcaagcgcggcgagttggcgctggcgatcgagaagggccgcgtgatcggggtgcag
cgggcgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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