KEGG   Bordetella parapertussis 12822: BPP2600
Entry
BPP2600           CDS       T00140                                 
Symbol
ihfA
Name
(GenBank) integration host factor alpha-subunit
  KO
K04764  integration host factor subunit alpha
Organism
bpa  Bordetella parapertussis 12822
Brite
KEGG Orthology (KO) [BR:bpa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpa03032]
    BPP2600 (ihfA)
   03036 Chromosome and associated proteins [BR:bpa03036]
    BPP2600 (ihfA)
   03400 DNA repair and recombination proteins [BR:bpa03400]
    BPP2600 (ihfA)
DNA replication proteins [BR:bpa03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    BPP2600 (ihfA)
Chromosome and associated proteins [BR:bpa03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    BPP2600 (ihfA)
DNA repair and recombination proteins [BR:bpa03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      BPP2600 (ihfA)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_1 HU-CCDC81_euk_2 HU-DNA_bdg
Other DBs
NCBI-ProteinID: CAE37892
UniProt: Q7W7C5
Position
2802891..2803232
AA seq 113 aa
MGTTMLAEPRTLTKAELAELLFERVGLNKREAKDIVDTFFEEIRDALARGDSVKLSGFGN
FQVRDKPPRPGRNPKTGETIPIAARRVVTFHASQKLKSVVEQPSSPPDPASAE
NT seq 342 nt   +upstreamnt  +downstreamnt
atggggaccactatgcttgccgagccgcgtacgttgaccaaggccgagctggccgaactg
ctcttcgagcgggtcggcctgaacaagcgcgaagccaaggacatcgtggacacctttttc
gaagagatccgcgacgcgcttgcgcgcggtgactcggtgaaattgtcggggttcggcaat
ttccaggtgcgggacaagccgcccaggcccggccgcaatcccaagacgggcgagaccatc
cccatcgcggcgcggcgcgtggtcaccttccacgccagccagaaactcaagagcgtggtc
gaacagcccagctcgccgccggaccccgcctctgcggagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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