KEGG   Bordetella parapertussis 12822: BPP3503
Entry
BPP3503           CDS       T00140                                 
Symbol
soxA
Name
(GenBank) sarcosine oxidase alpha subunit
  KO
K22086  methylglutamate dehydrogenase subunit C [EC:1.5.99.5]
Organism
bpa  Bordetella parapertussis 12822
Pathway
bpa00680  Methane metabolism
bpa01100  Metabolic pathways
bpa01120  Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:bpa00001]
 09100 Metabolism
  09102 Energy metabolism
   00680 Methane metabolism
    BPP3503 (soxA)
Enzymes [BR:bpa01000]
 1. Oxidoreductases
  1.5  Acting on the CH-NH group of donors
   1.5.99  With unknown physiological acceptors
    1.5.99.5  methylglutamate dehydrogenase
     BPP3503 (soxA)
SSDB
Motif
Pfam: GCV_T SO_alpha_A3 Fer2_4 Pyr_redox_2 GCV_T_C FAD_oxidored Pyr_redox_3 NAD_binding_8 FAD_binding_2 HI0933_like FAD_binding_3 Thi4 DAO GIDA AlaDh_PNT_C Lycopene_cycl NAD_binding_7 NAD_binding_9 Pyr_redox Fer2_BFD 3HCDH_N
Other DBs
NCBI-ProteinID: CAE38787
UniProt: Q7W503
Position
complement(3786393..3789332)
AA seq 979 aa
MTQQYRLNHGGLVDRRRPLTFRFDGIQYQGYHGDTLASALLANGVHLVGRSFKYHRPRGI
YTAGVEEMNALVDVLKEGQADPNTRATVVELEDGIEVSSQNRWPSLRFDVRSFHGMISRL
IPAGFYYKTFMWPAKFWPKYEHMIRHAAGLGRAPLVRDRDRYEKQHAYCDVLVVGAGPAG
LAAARSACQAGLRVLLVDEKSRVGGTLPGSNTEIEGVAGAKWATAVERELRESGHASVML
RTTAFGYYDHDTVALAQQCDTPTNPHGATQRLWYVHAKQVVLAAGAIERPCVFANNDLPG
VMLASAARTYCNEFGVAVGRRVLVLANNDSAYEAALDLKRAGIDIVGVVDQREAVSASLS
ETLASLRIPHHRGSTIKKATGRHRVRCAVIVDQSGLRQTVRCDAILVSGGWTPSVHLHSQ
SGGKVGYDADLSTFVPTSTKQHSLSIGACAGRLQLSECLADGASICAQMDGEAQGRGHPA
TPPKAEKLVIPPPHLGYRAGKRFIDIQDDVTVEDIELAARENFRSVEHLKRYTTLGMGTD
QGKTSNVNGLTIMGALRSESPGAVGTTTFRPPYTPIRLGLLSGRHIDRHFSAVRVSPMHE
WHVRNGAVMGPANLWLRPKAYLRGNESYAQAWQRECRNVRQDVGIVDVSTLGKIEVQGPD
AGVFLDRVYANRISTLKVGKARYGVLLREDGIVFDDGTIARWGERLFILSTTTANAAAVM
SHFEFLLATAWPTLRVRVTSVTDHYAQIALAGPKSREVLERLQISADVTDSALPHMAVCE
TVWNGLKLLIYRVSFSGERAYELAIAAAYGQRLWDQLLAVGAPFSIMPYGTEAMGALRIE
KGHPAGPELDGRTTAADLGLGGLVKKEGAFVGKALLGREGLQAADRPTLVGLRSKSGAAI
QSGSMLVLRAEVGAQELGWVASATYSPTLGQHIALGFLVNGANALGRSVLAWSALTSSQV
EVEVVNPCFVDIERERLLG
NT seq 2940 nt   +upstreamnt  +downstreamnt
atgacgcagcaatataggttgaatcatggcggattggtcgaccgtcgtcgcccgctgaca
ttccggttcgacggcattcagtatcagggctaccacggcgacacgcttgcctcggcgctg
ctggcaaacggcgtgcatctggtcggccggagtttcaagtatcaccggccacgcggcatc
tataccgcaggcgtcgaggaaatgaatgcgctggtcgacgtcctgaaggagggccaggcc
gacccgaacaccagggcgacggtggtggagctggaggatggcatcgaagtgtcgagccag
aaccgctggccgtcgctgcgcttcgatgtgcgctccttccatggcatgatttcccggctc
atccctgcaggcttctactacaagaccttcatgtggccggcgaagttctggccgaagtac
gaacatatgattcgtcacgcggccggcctggggcgcgcgccgctggttcgggatcgggac
cgctacgagaagcagcacgcttactgcgatgtgctggtcgtgggcgccggccctgcgggg
ctcgccgctgcgcgatcggcctgccaggccggcctgcgcgtgctgctggtcgacgagaag
agccgcgtgggcgggacgctgcccgggtcgaacaccgagatcgagggcgtggcaggcgcc
aagtgggcgactgcggtggagcgcgaactgcgtgaatccggccacgccagcgtcatgctg
agaacaacggccttcgggtattacgaccacgacacggtagcactggcccagcagtgcgac
accccgaccaatccccacggcgccacgcaacggctctggtacgtgcatgcaaagcaggta
gtgctggcggccggcgccatcgagcggccttgcgtctttgccaacaacgacctaccgggc
gtcatgctcgcaagcgccgcccggacctattgcaacgagttcggggtggcggtcgggcga
cgcgttctggtgctggccaacaacgattcggcctacgaggcggccttggacctgaagcgt
gccggtatcgacatcgtcggcgtggtggatcagagggaggcggtcagcgcgagcctgtcc
gagacgctggcaagcctgcgcatcccgcatcatcgcggctcgacgatcaagaaggcgacg
ggacgtcaccgggttcgttgcgccgtcattgtcgatcagtccggactgcgccaaaccgtc
cgttgcgacgcgatactggtctccggcggttggacgcccagcgtccatctccattcgcag
tcgggcggaaaggtcggctacgacgcggacctgagcacattcgttcccacgagcaccaag
cagcacagcctgtcgatcggggcgtgcgcgggtcgtctgcagctgtcggaatgcctggcg
gacggcgcgtccatttgcgcgcagatggatggagaagcgcaagggcgcgggcatccggcc
acgccccccaaggcagagaagctggtcattccgcctccccacctgggctaccgcgccggc
aaacgtttcatcgacatacaggatgacgtgacggtcgaagacatcgagctggccgccaga
gagaacttccggtcggtggagcacctgaagcggtacaccacgcttggaatgggaaccgac
cagggcaagacgagcaacgtcaacgggctcaccatcatgggcgctctgcgctcggagtcg
cctggcgccgtgggcacgacgacctttcgtccgccgtacactccgatccggttggggctg
ctgtccggcaggcatatcgacaggcatttcagtgcggttcgcgtcagcccgatgcatgaa
tggcatgtgcgcaatggcgcggtgatgggaccggcgaatctctggctgaggccgaaggca
tacctgcgtggcaacgagtcctatgcgcaggcgtggcagcgcgaatgcaggaatgtccgc
caggacgtgggtatcgtggacgtatccacgctcggcaagatcgaggtccagggcccggac
gcaggcgtcttcctggatcgggtgtatgccaatcggataagcacgctgaaggtcggcaag
gcgcggtatggcgtgctgctcagagaggacggaatcgtcttcgacgacggcaccatcgcc
cgctggggagagcggctgttcatcctgtcgacgacgacggccaacgcggcggccgtgatg
tctcacttcgagtttctgttggcgaccgcatggcccacgttgcgggtccgggttacctcc
gtgacggatcactacgcccagattgcgttggcggggcccaagagccgtgaggtgctggag
cgcctgcagatttcggccgacgtgacggattcggcgcttcctcatatggcggtgtgcgaa
accgtctggaacggcctgaagctgttgatctatcgggtcagcttttcgggggagcgggcg
tatgagcttgcgatcgccgcggcatacggccaaaggctgtgggaccagcttctggcagtg
ggcgctccattttccatcatgccctacgggaccgaggccatgggcgcgctgcgaatcgag
aaggggcatcccgccggtccggaactggacggccgtacgaccgccgccgaccttgggctg
ggtgggctcgtgaaaaaggagggggctttcgtgggcaaggcgctgctgggccgcgaggga
ctgcaggccgccgatcggccgacgttggtgggcttgcgcagcaagtccggcgccgcgatc
cagtccgggtccatgctggttctccgtgccgaagtcggcgcccaggaactgggctgggtg
gcttccgccacctacagtcccacgctgggccagcacatcgcgctgggtttcctggtgaac
ggcgcaaacgcgctgggacggtccgtgctggcatggtctgcgctgacctcgtcgcaggtg
gaggtcgaagtggtcaacccatgcttcgtcgatatcgaacgggagcgtctccttggataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (21)   
   Pfam (21)   
All databases (39)   

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