KEGG T03987: X966

Borrelia parkeri: X966_02175

Entry

X966_02175        CDS       T03987

Symbol

gyrB

Name

(GenBank) DNA gyrase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

bpak Borrelia parkeri

Brite

KEGG Orthology (KO) [BR:bpak00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpak03032]
    X966_02175 (gyrB)
   03400 DNA repair and recombination proteins [BR:bpak03400]
    X966_02175 (gyrB)
Enzymes [BR:bpak01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     X966_02175 (gyrB)
DNA replication proteins [BR:bpak03032]
Prokaryotic type
  DNA Topoisomerases
   X966_02175 (gyrB)
DNA repair and recombination proteins [BR:bpak03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      X966_02175 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c B1 HATPase_c_3

Other DBs

NCBI-ProteinID:

AHE62756

Position

complement(455384..457288)

AA seq 634 aa
MSYVASNIQVLKGLEAVRKRPGMYIGSVSINGLHHLVYEVVDNSIDEALAGFCDKIEVVI
NSDNSVTVNDNGRGIPTDIHEEEGISALELVLTKLHSGGKFNKGTYKVSGGLHGVGISVV
NALSSFLEVVVSRDGNFFKQTYSRGIPTSGVEIVGVSSNRGTKVTFLADSEIFETLEYDF
ETLSKRLRELAFLNDKIRISIEDKRLGKERFLEFYFEGGIKAFVDFITNNSKTIQSESYF
IEGTCDDVIVSVGLKWTEGFSDNILSFVNNINTREGGTHVAGFKSGFLKAMSEAFKDSKV
SKKDVPNLTLDDFKEGLTAVISIKVPEPQFEGQTKGKLGNSYIKKIVETIVHNELLKVIG
DNLLEVDIILNKAIRAARAREAARKARESERKKSAFESLALPGKLADCASKNPVEREIYI
VEGDSAGGSAKMGRDRFYQAILPLWGKMLNVEKTREDKVITNDKLIPIIASLGAGVGKNF
YIEKLRYHKIIIMADADVDGSHIRTLLLTFFFRYMRELIDNGHVYIAMPPLYKIKYENSV
HYFYDDSEKEIFLSSIETGKRDKISLQRYKGLGEMNPTQLWETTMNPATRKMKLIEIDDA
IQAENIFVTLMGDDVEPRREFIEQNALDVVNLDV

NT seq 1905 nt +upstreamnt +downstreamnt
atgagttatgttgctagtaatattcaagtgttaaagggccttgaagctgttagaaaaagg
cctggtatgtatattggatccgtttcaattaatggattgcatcacttggtttatgaagtg
gttgacaatagtattgatgaggctttagcgggtttttgcgataaaatagaagttgttata
aattcagataattctgtaacagtcaatgataatggtagaggaattcctacagatattcat
gaggaggaaggaattagtgctcttgaacttgttttgactaagctacattctggaggaaaa
tttaataaaggtacttataaagtttctggtggacttcatggggttgggatttcggttgtt
aatgctttatcatcttttttagaagttgttgtgagcagagatggaaatttttttaagcag
acttattccagaggtattccaacatctggggttgagattgttggggtaagttctaatagg
ggtactaaggttacttttttagctgattctgagatttttgaaaccttggagtatgatttt
gaaactttatcaaagagattgagggaacttgcatttttaaatgataagatacgaatttca
attgaagataagagattgggaaaagagagatttttagaattttattttgaaggtggaata
aaagcttttgtagattttataacaaataatagcaaaactattcaaagtgagtcctatttt
attgaaggaacttgtgatgatgttattgttagtgttggacttaagtggactgaagggttt
tctgataatattttatcgtttgtaaacaatattaatactagagaaggaggaactcatgtt
gctggttttaaaagtggtttcttaaaggcaatgagtgaagcttttaaggattcaaaggta
agcaaaaaagatgttccaaatcttacattagatgattttaaggagggtttaacagcggta
atttctattaaggttccagaacctcaatttgaaggtcaaactaaagggaaattgggaaat
tcttatataaaaaaaattgttgaaactattgtacataatgagcttttgaaagttattggt
gataatcttttagaagtagatattattcttaataaggcaataagagctgctcgtgctcgt
gaggctgcaagaaaagcaagagagtctgagagaaaaaaaagtgcatttgaaagcttggca
ttgcctggcaaattggcagattgtgcatctaaaaacccggttgaaagggaaatttatatt
gtggaaggggattctgcaggaggaagtgcaaaaatgggaagagataggttttatcaagct
atcttgccattgtggggtaaaatgcttaatgttgaaaaaacacgggaagataaggttatt
acaaatgataagcttattccaataattgcatctcttggtgctggagttggaaagaatttt
tatattgaaaaacttcgttatcataagattattattatggctgatgccgatgttgatggg
tctcatattcgaacattgcttcttacttttttctttcgttacatgagggagttaattgat
aatggacatgtatatatagctatgccacctctttataaaattaagtatgaaaatagtgtt
cattacttttatgatgattcggaaaaggaaatttttttaagctctatcgagactggcaaa
agggataaaattagtcttcaaaggtataaggggcttggtgaaatgaatcctacacaactt
tgggaaaccactatgaatcctgctactagaaaaatgaaattaatagagatagatgatgct
atacaggctgagaatatttttgttactcttatgggagatgatgttgagcctagaagagaa
tttattgagcagaatgcgcttgatgtagtaaatcttgatgtgtga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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