KEGG   Bordetella parapertussis Bpp5: BN117_2354
Entry
BN117_2354        CDS       T02297                                 
Name
(RefSeq) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
bpar  Bordetella parapertussis Bpp5
Pathway
bpar03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bpar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BN117_2354
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpar03400]
    BN117_2354
Enzymes [BR:bpar01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     BN117_2354
DNA repair and recombination proteins [BR:bpar03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     BN117_2354
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-GeneID: 13890391
NCBI-ProteinID: YP_006896262
UniProt: K0MI93
Position
complement(2544788..2545570)
AA seq 260 aa
MKLATWNVNSLNVRLPQVLDWLAANPVDALCIQELKLTDDKFPLDAFTEAGYHAAWAGQK
TYNGVAIISREPGFALVRNNPRYEDPQQRILAVTLPSPAGDVRVICAYCPNGQSVDSDKY
VYKLAWFDGLRDWLEEEMRTYPRLAILGDYNVAPADADVHNPEKWEGQVLVSEPERAAFR
ALLDLGLTDSFRLFEQPEKSFSWWDYRQFAFRRNAGLRIDHVLLSDALKPHCVACVIDKA
PRANEQPSDHAPVIATLAFG
NT seq 783 nt   +upstreamnt  +downstreamnt
gtgaaactcgcgacttggaacgtcaactccctgaatgtgcgcctgccgcaggtgctggac
tggctggccgccaatccggtcgatgcgctgtgcatccaggaactcaagctgaccgacgac
aaattcccgctcgacgcctttaccgaggccggctaccacgccgcctgggccggccagaag
acctataacggcgtggccatcatctcgcgcgagcccggcttcgcgctggtgcgcaacaac
ccgcgctacgaagacccgcagcagcgcatcctggccgtgaccctgcccagcccagccggc
gacgtgcgcgtgatctgcgcctattgccccaacggccagtcggtcgacagcgacaagtac
gtctacaagctggcctggttcgacggcctgcgcgactggctcgaggaagaaatgcgcacc
tatccgcgcctggccatcctgggcgactacaacgtcgcgccggccgacgccgacgtgcac
aaccccgagaaatgggaaggccaggtgctggtctccgagcccgaacgcgcggccttccgc
gcgctgctggacctgggcctgaccgactccttccgcctgttcgagcagcccgagaaatcc
ttcagctggtgggactaccgccagttcgcgttccgccgcaacgccggcctgcgcatcgac
cacgtgctgctgtccgacgcgctcaagccgcactgcgtggcctgcgtcatcgacaaggcg
ccgcgcgccaacgaacagccgtccgaccacgcgccggtcatcgccaccctggcgttcggc
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system