KEGG   Bordetella parapertussis Bpp5: BN117_3321
Entry
BN117_3321        CDS       T02297                                 
Name
(RefSeq) bacteriophage-related DNA polymerase
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
bpar  Bordetella parapertussis Bpp5
Pathway
bpar03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bpar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BN117_3321
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpar03400]
    BN117_3321
Enzymes [BR:bpar01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     BN117_3321
DNA repair and recombination proteins [BR:bpar03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BN117_3321
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-GeneID: 13891358
NCBI-ProteinID: YP_006897130
UniProt: K0MIN2
Position
complement(3579543..3580298)
AA seq 251 aa
MSAPEAAVPAAPRPNPLQRIWLREIGIEKTWLPAPLASAAGAAAPAAPVAEADGQAARAA
VAARAAGADLGQLQQLVQDCTACGLCQGRRHAVFGMGAQPARWMVVGEAPGEQEDRQGLP
FVGRSGKLLDAMLQSVGMSRERDVFIANVIKCRPPGNRNPKPEEIAACSPYLRRQIALLN
PERILVLGRFAAQTLLGTEATIGNLRGRVHSLQTDEGRSIPVVVSYHPAYLLRSPAEKAR
AWQDLLLAARG
NT seq 756 nt   +upstreamnt  +downstreamnt
atgagcgcgcctgaggccgccgtgccggccgcgccgcgtccgaatccgctgcagcggatc
tggctgcgcgagatcggcatcgagaaaacctggctgccggcgccattggcgtccgcggcc
ggggctgccgcgcccgccgcgcctgtcgccgaggccgacggacaggccgcgcgggccgcc
gtggcggcgcgggctgccggcgccgacttggggcaattgcagcagctggtgcaggactgc
accgcctgcggcctgtgccaggggcggcgccacgccgtgttcggcatgggcgcccagcca
gcgcgctggatggtggtgggcgaggcgcccggcgagcaggaagaccgccaggggctgcca
ttcgtcggccgctcgggaaagctgctggatgcgatgctgcagtcggtgggcatgagccgc
gagcgcgacgtgttcatcgccaacgtcatcaagtgccgcccgcccggcaaccgcaatccc
aagcccgaggaaatcgccgcctgcagtccctacctgcggcgccagattgccctgctgaac
ccggagcgcatcctggtgctgggccggttcgcggcccagacgctgctgggcaccgaggcc
acgataggcaatttgcgcggccgcgtgcacagcctgcaaaccgacgaggggcgctcgatt
cccgtggtggtcagctaccacccggcctatctgttgcgcagcccggccgagaaggcgcgc
gcctggcaggacctgctgctggcggcgcgcggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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