KEGG   Butyrivibrio proteoclasticus: bpr_II163
Entry
bpr_II163         CDS       T01292                                 
Symbol
ligA2
Name
(GenBank) NAD-dependent DNA ligase LigA2
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
bpb  Butyrivibrio proteoclasticus
Pathway
bpb03030  DNA replication
bpb03410  Base excision repair
bpb03420  Nucleotide excision repair
bpb03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bpb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    bpr_II163 (ligA2)
   03410 Base excision repair
    bpr_II163 (ligA2)
   03420 Nucleotide excision repair
    bpr_II163 (ligA2)
   03430 Mismatch repair
    bpr_II163 (ligA2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpb03032]
    bpr_II163 (ligA2)
   03400 DNA repair and recombination proteins [BR:bpb03400]
    bpr_II163 (ligA2)
Enzymes [BR:bpb01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     bpr_II163 (ligA2)
DNA replication proteins [BR:bpb03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     bpr_II163 (ligA2)
DNA repair and recombination proteins [BR:bpb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     bpr_II163 (ligA2)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     bpr_II163 (ligA2)
   MMR (mismatch excision repair)
    DNA ligase
     bpr_II163 (ligA2)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      bpr_II163 (ligA2)
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB BRCT PTCB-BRCT BRCT_2 DNA_ligase_ZBD P22_AR_N
Other DBs
NCBI-ProteinID: ADL36101
UniProt: E0S3W9
Position
pCY360:complement(100409..102646)
AA seq 745 aa
MNEIELNTALGEQLSKKDYEKLKNKLMDLARAYYDDDAPKVSDHEYDMLMVQLKACEKKN
PSWVTDDSISQVIGGTASSKFSKVTHDVPMLSIEDVFNKESVKEWMENVKTNYPDAGFTV
EEKIDGLSCTLRYKTNDTEPYDEANCVCYDLVLAETRGNGIIGEDVTENVLQIPDVPKRL
FLSHDLYGDSFQVRGEIYMKHENFEKFNEKEVKAGRKPAANPRNLAAGTLRQKEAVLVKE
RGLNMFIFRVQKVEGATRDILTRTQYEAMQILKKDGFKTAICGFARTFEEVEALIDEYET
HKDGRFGYDIDGAVVKIDVIEHQDDFSTSSKYIPGHIAYKYPQKEQKARVTDIDVALGRT
GKLTFTAVVCDDETGEPLQMCGTSVSRVTLHNMDYIRERHIGIGGVYGIFKSGEIIPKLT
ETIYKEPERLFEVPTVCPFCGSPIVNLGSTDYFCSNDNCKERAIQQLDYFVGRDQMNIEG
LSIESIRFLDSKGYINASAPASLYFQAEKWHEDGVFAKLGKPEIHLENEDGWSEKSVENL
VTAIDKSRTSDFIRVLASFGLPNVGHGQAKLLKKAIEKFDGKEANYFGRLLEMYKAGYDF
SKIEGFGDVIKKTLNDFCQSILDLGIPDKDHTAQKYVDLLDAVDILFIEEKAAGASSLEG
LTFVVTGSFENYKPRKLLEDEIESLGGKVSGTVSAKTSYLINNDTTSSSGKNKKAKELGV
KIISEQEYRAMAYLGNISLGNSIEK
NT seq 2238 nt   +upstreamnt  +downstreamnt
atgaacgagattgaattaaatacagcacttggcgagcagctttctaaaaaagattatgaa
aagcttaaaaataagctcatggatcttgccagagcatattatgatgacgatgctccaaaa
gtttctgatcatgaatatgacatgctgatggtgcagcttaaggcctgtgagaaaaagaat
ccttcctgggttacggatgattctatcagccaggtgatcggaggaactgcttcgagtaag
ttctcgaaggttactcacgacgtaccaatgctctcaatagaggatgtttttaataaagaa
tcagtaaaagagtggatggaaaatgttaagacaaactaccctgatgcgggttttaccgtt
gaagagaagattgacggtctttcctgtacactccgctataagaccaatgatactgagcct
tatgatgaggctaactgtgtctgctatgatcttgtgcttgctgagacaagaggtaacggc
atcattggcgaagatgttacagaaaatgtactgcagatccctgatgttccaaaaagactc
tttttatctcatgacctgtacggagattccttccaggtgcgtggtgagatctatatgaag
catgagaactttgaaaagttcaatgaaaaagaagtgaaagctggaagaaagcctgctgcc
aatccaagaaatcttgctgcaggaacactcagacagaaagaagcagtcctcgttaaggaa
agagggctcaatatgtttatcttcagagtccagaaagtcgagggagctacaagagatatc
ctcacaagaacccagtatgaagcaatgcagatccttaaaaaagatggctttaagacagct
atctgcggatttgccaggacttttgaagaagttgaggctcttattgatgagtatgagact
cacaaggatggaagatttggatatgacatcgatggcgctgttgtcaagatcgatgttata
gaacaccaggatgacttctctacatcaagtaagtacattccaggccacattgcctataag
tatcctcagaaggaacagaaggcaagagtaactgatattgatgtagctcttggaagaaca
ggcaagcttaccttcacagctgttgtatgtgacgatgagactggagagcctcttcagatg
tgcggcacttcagtatcccgtgtaactcttcacaacatggattacataagagagcgccat
atcggaatcggtggagtatatggaatctttaagtcaggagagatcatccccaagcttaca
gagactatatacaaggaacctgaaaggctctttgaagtaccaactgtgtgtccgttctgt
ggttctcctattgttaaccttggaagtacggattacttctgttccaatgataactgcaaa
gagcgtgctatccagcagttggattattttgtcggaagagaccagatgaatatcgagggg
ctttcaatcgaatcgataagattccttgattcaaagggatatatcaatgcatcagcacct
gcttcattatatttccaggcggaaaagtggcatgaagatggagtatttgcaaagctcggg
aagcctgaaatacatcttgagaatgaggatggctggtcagaaaaaagcgtagagaacctc
gttactgctattgataagtcaagaacatctgactttatcagagtgttggcatcgtttggt
cttcctaatgttggacatggccaggctaagcttttaaagaaggcaatcgaaaagttcgac
ggcaaggaagctaactatttcggaagactccttgagatgtacaaggctggatatgacttt
agtaagatcgaaggatttggcgatgttattaagaagactctcaatgacttttgccagagt
atcttggatttaggcattccagataaagaccatacagctcagaagtatgtagatcttctt
gatgctgttgatatcctttttattgaggaaaaggcagcaggtgccagttctcttgaaggc
ctcacatttgtagttacaggttcttttgaaaactacaagccaagaaagcttttagaagat
gagatcgagtcacttggtggtaaggtatccggaactgtttcagcaaagacaagctatctg
atcaataatgacactacatcttcttctggaaagaataagaaggccaaagaacttggagtg
aagatcatttcagaacaggaatatcgcgctatggcatatcttggcaacatctcattaggg
aatagcatagaaaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (43)   

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